Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq10 116 3e-21 >seq10 Length=2329298 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || || || |||| || | |||||||||||| |||||||||||||| | Sbjct 1254789 CCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAA 1254730 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| |||| || ||||| ||| |||| | |||||||||||| ||| Sbjct 1254729 AGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGG 1254670 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||||| ||||| | | | ||| ||| || || | Sbjct 1254669 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACT 1254610 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| || ||||| || ||||| || ||||| || ||||| Sbjct 1254609 TCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||| | || |||||||||||||||||||| || | ||| || | | || Sbjct 1252950 AGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCT 1252891 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||||||||| ||| | || | ||| |||||||| || | || || || || Sbjct 1252890 TCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCC 1252831 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | | | |||||| ||||| ||||| ||| || || Sbjct 1252830 TGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTT 1252771 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 ||||| |||| || || ||||| || ||||||||| Sbjct 1252770 TTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTTG 1252735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422183575356620