Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq170 147 2e-30 seq39 116 4e-21 seq10 113 5e-20 >seq170 Length=322284 Score = 147 bits (162), Expect = 2e-30 Identities = 290/428 (68%), Gaps = 6/428 (1%) Strand=Plus/Plus Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 || ||||| || || || | || || || ||| ||||||| || ||||| || ||| Sbjct 23998 TTCAACGCAATTGAAACCTTACCCTGTGTTAAAAAGAAGGCTGACTGGGCCATGGCTTGG 24057 Query 117008 ATCGCCGGCAGAGAGGCCGCC---TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAG 117064 || | ||| || | || ||||| || | | | || || || || |||||| Sbjct 24058 ATATCAAGCA---AGTCAGCTAATTTCGGTGAAAGAATAATTGCTTTTGCTGCAGTCGAG 24114 Query 117065 GGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATG 117124 || ||||||| |||||||| || | || || ||||||||||| | ||| | ||| Sbjct 24115 GGAATCTTCTTCAGTGGCAGTTTTGCATCAATTTTCTGGCTCAAGAAGAGGGGCATTATG 24174 Query 117125 CCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTT 117184 || || |||||||| |||||| || || ||| | ||||| || | |||||||| ||| Sbjct 24175 CCTGGTCTGACTTTTTCCAACGAACTTATATCCCGTGACGAAGGCTTACATTGCGATTTT 24234 Query 117185 GCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATC 117244 || ||||| ||||||| ||| | || ||| || ||| || || | | ||||| Sbjct 24235 GCTTGTTTAATGTTCAAACATCTTGTACAGAAGCCCAGCAGGGATCGAATTATCGAGATA 24294 Query 117245 GTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTG 117304 || | || || || || || |||| || | ||||| || || || || ||| Sbjct 24295 ATCTCAGAGGCAGTAAAAATTGAACAGCAATTTTTGACCGACGCCCTACCTGTAAATCTT 24354 Query 117305 CTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTG 117364 | || | || ||| ||||| || ||||||||||||||||| ||| |||| ||| Sbjct 24355 ATTGGGATGAACTGCATGTTGATGTGCCAGTACATCGAGTTCGTCGCAGACCGGCTTCTG 24414 Query 117365 CTCGAGCT 117372 ||||||| Sbjct 24415 GTCGAGCT 24422 Score = 113 bits (124), Expect = 5e-20 Identities = 173/243 (71%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGAC--ACGAGCGA 116712 |||| || || ||||| ||||| || ||||| || |||| || || ||| || ||| | Sbjct 23648 AGGCTGAAGCCTCGTTTTGGACAGTGGAGGAAGTAAACCTTTCGAATGACTTAC-AGC-A 23705 Query 116713 CTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGC 116772 |||||| | | | ||| || ||||| |||||||| || || ||||| Sbjct 23706 TTGGGAGAAACTATCAGCCGGTGAGAAGCACTTCATTTCACACGTGCTAGCTTTCTTCGC 23765 Query 116773 CGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGT 116832 ||| |||||| || || || || ||||| || ||||||||| ||||||||||| | Sbjct 23766 TGCCTCCGACGGAATTGTAAATGAAAATCTCGTGGAGCGTTTCAGCCAGGAGGTGCAAAT 23825 Query 116833 GGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAAT 116892 | || || || | ||||||||||| || || ||||| || || || ||||||||||| Sbjct 23826 CCCGGAAGCTCGCTTTTTCTACGGCTTCCAAATTGCCATAGAAAATGTCCACTCGGAAAT 23885 Query 116893 GTA 116895 ||| Sbjct 23886 GTA 23888 >seq39 Length=1160777 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||| ||||| || ||||||||||| || || || || |||||||| | || ||||| | Sbjct 534919 AAACATGCAGATCTTCGTAAAAACCCTAACCGGTAAGACCATCACTCTTGAGGTCGAGCC 534978 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | | |||| | ||| |||| | || || | ||||| ||||| |||||| | || Sbjct 534979 CTCAGACACTATTGAAAATGTCAAAGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGA 535038 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || || || || || | ||| || |||||||| || || | ||||| || ||| || Sbjct 535039 TCAACAGCGTCTGATTTTCGCCGGTAAACAGCTTGAGGATGGTCGCACACTTTCCGATTA 535098 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||||||| | || ||||| Sbjct 535099 CAACATCCAGAAGGAGTCTACCCTGCA 535125 >seq10 Length=2329298 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || ||||| || |||||| | || || ||| || | Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | || | ||||||| |||||||||||||| || | || || Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAA 1253086 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || |||||| |||| || | || || ||| ||| ||||| Sbjct 1253087 CAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAAT 1253146 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| || ||| | || || ||||| ||| || | ||||| || || Sbjct 1253147 ATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGG 1253193 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA- 40747 |||||| || || ||||| || | || |||||||| ||||| | || ||||| |||| Sbjct 1253878 AATGCAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGA-GCCAT 1253936 Query 40748 CCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | | | | || | || || | || || ||||| ||||| |||| | Sbjct 1253937 CCGATACCATTGAGAATGTTAAAGCTAAGATCCAAGATAAGGAGGGTATCCCACCGGATC 1253996 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||||||||||| || || ||||| | || || | ||||| | ||| |||| Sbjct 1253997 AGCAACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACA 1254056 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||| |||||| | || || ||||| || |||| Sbjct 1254057 ACATCCAAAAGGAGTCAACTCTCCATCTGGTTCTGCG 1254093 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || || || || || || || |||||||| |||||| | || || || | Sbjct 1252736 AAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCCT 1252795 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || | | | | ||||| | |||| || |||| || |||||||| || || | || Sbjct 1252796 TCTGATACCATTGAAAACGTT-AAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGA 1252854 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||||||| || | |||| || ||||||||||| || || | ||||| || || || Sbjct 1252855 CCAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTA 1252914 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || |||||| | || || ||| Sbjct 1252915 TAACATTCAAAAGGAGTCGACCCTACAT 1252942 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || |||||||| ||||| | || || ||| | | Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| |||||||| || || || | || || Sbjct 1254851 GACACAATTGAGAACGTT-AAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCA 1254909 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || || || || |||| |||| ||||| | |||||| || Sbjct 1254910 ACAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAA 1254969 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 |||||||||||| |||| || ||| Sbjct 1254970 CATCCAGAAGGAATCCACTCTCCAT 1254994 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || |||||||| ||||| | || || ||| | | Sbjct 1253423 ATGCAGATTTTCGTGAAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCT 1253482 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| ||| |||| || || || || || || | || ||| Sbjct 1253483 GACACTATTGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAG 1253542 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||||||||||| || || ||||| |||| || | || ||| | || || || Sbjct 1253543 CAACGACTCATCTTTGCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAAT 1253602 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| |||| || || Sbjct 1253603 ATTCAGAAGGAGTCCACCCTCCA 1253625 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || | ||||| ||||| ||||| | || || ||| | | Sbjct 1255018 AATGCAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTC 1255077 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | ||| |||||| ||||| | || || || || || || | || || Sbjct 1255078 TGATACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1255137 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | || | || || ||||| || || || | ||||| || ||| || || Sbjct 1255138 GCAACGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAA 1255197 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || ||||||| || Sbjct 1255198 CATCCAGAAGGAGTCAACCTTGCATCTTGT 1255227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515124560673200