Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq3563 129 4e-25 seq3509 129 4e-25 >seq3563 Length=1406 Score = 129 bits (142), Expect = 4e-25 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTC 97062 ||| | || |||||||| ||| || ||||||||||| | | |||||||||||| Sbjct 367 AGTTTCGGAAAAGGCCTCGGAACTCTTTTAAGCTGCTCTTGCAACGGTTCAATGTGATTC 308 Query 97063 ACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACA 97122 | ||| | ||||||||||| || || || | ||| |||||||| || | ||||| Sbjct 307 AGATATACATGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACG 248 Query 97123 TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || || | ||| |||| | || | ||||| || ||||||||||| ||||| |||||| Sbjct 247 TGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCC 188 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 || || || || || ||||| | ||| || || |||| ||| | ||||| ||||| Sbjct 187 ATGTCGGCAGACCTCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTG 129 >seq3509 Length=1415 Score = 129 bits (142), Expect = 4e-25 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 97003 AGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTC 97062 ||| | || |||||||| ||| || ||||||||||| | | |||||||||||| Sbjct 1049 AGTTTCGGAAAAGGCCTCGGAACTCTTTTAAGCTGCTCTTGCAACGGTTCAATGTGATTC 1108 Query 97063 ACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACA 97122 | ||| | ||||||||||| || || || | ||| |||||||| || | ||||| Sbjct 1109 AGATATACATGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACG 1168 Query 97123 TGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCC 97182 || || | ||| |||| | || | ||||| || ||||||||||| ||||| |||||| Sbjct 1169 TGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCC 1228 Query 97183 ATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 || || || || || ||||| | ||| || || |||| ||| | ||||| ||||| Sbjct 1229 ATGTCGGCAGACCTCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTG 1287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346721892611150