Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq44 150 3e-31 seq10 150 3e-31 seq408 145 1e-29 seq39 95.1 2e-14 >seq44 Length=1094211 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || |||||||| || ||||||| ||||| ||||| || || ||| | ||| | ||| | Sbjct 805339 ACCATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCC 805398 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| ||| ||| | ||| || |||||||||||||||||||| || || ||| Sbjct 805399 TCTGATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGAT 805458 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||| | || || ||||| || |||||||| |||||| |||| ||| | || || Sbjct 805459 CAACAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTAC 805518 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||| ||||| |||||||| | || ||||| | || | || |||||| Sbjct 805519 AATATCCAAAAGGAATCAACCCTCCACTTGGTGCTTCGCCTCCGTGGTGGT 805569 >seq10 Length=2329298 Score = 150 bits (166), Expect = 3e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| |||||||| | || ||||||||||| ||| | || | || || Sbjct 1253878 AATGCAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATC 1253937 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| || || |||||||| || ||||| ||||| ||||| Sbjct 1253938 CGATACCATTGAGAATGTTAAAGCTAAGATCCAAGATAAGGAGGGTATCCCACCGGATCA 1253997 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || ||||| || ||||||||||||||| |||| || || ||||| || Sbjct 1253998 GCAACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACAA 1254057 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || |||||| | ||| ||||| | ||| |||| ||||| || Sbjct 1254058 CATCCAAAAGGAGTCAACTCTCCATCTGGTTCTGCGTCTACGTGGTGGAAT 1254108 Score = 140 bits (154), Expect = 5e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||| ||||| || || ||||| || || |||| |||| | | Sbjct 1253195 ATGCAGATTTTTGTAAAAACACTGACTGGGAAAACAATTACATTAGAAGTTGAGCCTTCT 1253254 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | ||| ||||| ||||||||||||||||| || || |||||| Sbjct 1253255 GATACAATTGAAAATGTGAAAGCCAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 1253314 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | |||||||| || ||||| | |||||| |||| || | || ||||| Sbjct 1253315 CAGCGTTTGATTTTTGCTGGTAAACAGCTTGAGGATGGTCGTACTCTCTCCGACTATAAC 1253374 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || ||||| ||| | ||||| ||| ||||| | || || ||||| Sbjct 1253375 ATTCAGAAGGAATCCACTCTACATTTAGTTCTACGTCTTCGCGGAGGTAT 1253424 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || || || ||||| || || || | || ||||| | | Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| ||| | ||| ||||||||||| ||||| || || ||||| |||||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAA 1253086 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| ||||| |||||||| || |||||| |||| ||| | ||||| ||| Sbjct 1253087 CAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAAT 1253146 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| || || | ||| | || | | || |||| ||||| Sbjct 1253147 ATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGGTAT 1253196 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | || || || || |||||||| || || | || ||||| | | Sbjct 1253423 ATGCAGATTTTCGTGAAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCT 1253482 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || ||||||||||| ||||| || || || ||||| Sbjct 1253483 GACACTATTGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAG 1253542 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || || ||||| || |||||||| |||||| | || || ||| ||||||||| Sbjct 1253543 CAACGACTCATCTTTGCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAAT 1253602 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || | || ||||| ||||| | || ||||| || Sbjct 1253603 ATTCAGAAGGAGTCCACCCTCCACTTGGTACTACGTCTCCGGGGTGGAAT 1253652 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| |||| ||||||||||| ||| | ||| ||||| | Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| || | || || ||||| || |||||||| || || || |||||| Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAA 1254910 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || || ||||| || || |||| || || || ||||| Sbjct 1254911 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAAC 1254970 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || ||||| ||| | |||||||| | || | || ||||| || Sbjct 1254971 ATCCAGAAGGAATCCACTCTCCATTTGGTACTTCGCCTCCGTGGTGGAAT 1255020 Score = 116 bits (128), Expect = 6e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||||||||||||||||||||| || | || |||| | Sbjct 1252738 AATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCCTTC 1252797 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| || | || || ||||| |||||||| || || || || || || Sbjct 1252798 TGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGACCA 1252857 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| | || ||||| || ||||| |||| ||| |||| || | |||||||| Sbjct 1252858 GCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTATAA 1252917 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 |||||||| || || || | |||||||| | ||| | || || || || ||| || Sbjct 1252918 CATTCAAAAGGAGTCGACCCTACATTTGGTCCTTCGTCTTCGTGGAGGGATGCAAATTT 1252976 Score = 107 bits (118), Expect = 3e-18 Identities = 167/239 (70%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || || | || || ||||| ||||| | || | ||| || Sbjct 1254106 AATGCAGATCTTCGTGAAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATC 1254165 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || |||||||| ||||| ||||| || || || ||||| Sbjct 1254166 CGATACCATCGAAAATGTTAAGGCTAAAATTCAGGATAAGGAAGGAATTCCCCCAGATCA 1254225 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | ||||| ||||| ||||| ||||| || ||| | || ||| | ||||| || Sbjct 1254226 GCAACGTCTTATCTTTGCTGGAAAGCAATTGGAAGATGGACGCACACTTTCTGATTACAA 1254285 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||||| ||||| ||| | || ||||| | || | || || ||||| ||| || Sbjct 1254286 TATTCAAAAGGAATCTACTCTCCACTTGGTCCTCCGACTTCGTGGAGGTATGCAAATTT 1254344 Score = 96.9 bits (106), Expect = 5e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | ||||| | || || || || || || | ||| ||||| || Sbjct 1253650 AATGCAGATTTTCGTTAAGACTTTGACCGGTAAGACAATTACATTGGAGGTTGAACCATC 1253709 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || ||||| || || ||||||||||| ||||| ||||| Sbjct 1253710 AGATACGATCGAGAATGTTAAGGCTAAAATCCAGGACAAAGAAGGTATTCCACCAGATCA 1253769 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | | || ||||| || || || || || ||| |||| || || ||||| || Sbjct 1253770 GCAACGATTGATCTTTGCCGGTAAGCAGTTGGAAGATGGTCGCACTTTGTCCGATTACAA 1253829 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || ||||| | ||| | ||| | ||| |||| ||||| || Sbjct 1253830 CATCCAAAAGGAGTCAACACTTCATCTAGTTCTGCGTCTACGTGGTGGAAT 1253880 >seq408 Length=31413 Score = 145 bits (160), Expect = 1e-29 Identities = 294/441 (67%), Gaps = 0/441 (0%) Strand=Plus/Plus Query 202868 CCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTAAATNNNNNNNN 202927 || || |||||||||||||| ||||||| | | || ||||| || | || Sbjct 25445 CCTACGTATCCATTTGGATCTTGTCCATCCAAACTGTACTTATCGTTGAGATAAATAGAA 25504 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 ||||||| |||||| |||| |||||||| | |||||||| ||||| ||||| Sbjct 25505 TATTCCAATGCTTGTTCTGGAGATTCAGTCCATTCGAGAATTTTTTTGGCCCAGTACATC 25564 Query 202988 CTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTTGTGATGCATTCCATAAA 203047 || ||| | ||||||||||| || | | | | || | || | | |||||| | | Sbjct 25565 CTCAAAAAGCCATGCATTTTCCCTTCTTTGACAAGCTGGATCTGGGCAGAATTCCAGAGA 25624 Query 203048 TTGTCATGAGTTAATGCATTTTCAAGTTGATATAAACTATATATATGTTTTCTAGTATCA 203107 | ||| ||||| | | |||| || | | | | || |||| | | || Sbjct 25625 TCGTCGTGAGTCTTGGAAGTTTCCAGCTCCTCTTTTGTGTAAATATAAGGACGTTTGTCT 25684 Query 203108 TTTTTATGTTCATTTAGTGTTTTTATTGCCCAATTATTAGCACCATTTATATTATCGTAA 203167 || ||| ||||| || || || | ||||| | || |||| ||||| ||| Sbjct 25685 TTGCGATGATCATTCAGAGTCTTGAGAGCCCAGCTGGCGATGCCGTTTAGGTTATCATAA 25744 Query 203168 TTTTCATTATAATAACAAAAATTATCACATAGTTCTTTACGAATAATAGCTTCTTCACAA 203227 |||||||||||| ||||||||||||| ||||||| | |||| |||||||| |||||| Sbjct 25745 TTTTCATTATAAAAACAAAAATTATCTGCTAGTTCTCTTCGAACTATAGCTTCCTCACAA 25804 Query 203228 AAAACTTCTACCGATTTAGGATATAATTTTTTATATTTGTTAATTTCTAATATTATTCTT 203287 ||| | |||| |||| || || ||||| |||||||| | |||||| || | Sbjct 25805 AAAGATGCTACGGATTCAGAATGGTGCTTTTTGTATTTGTTCACAGTTAATATACATCGT 25864 Query 203288 TGAGTTGAAATTTGACCAAAA 203308 || ||||| ||||| ||| Sbjct 25865 TGTACAGAAATCTGACCTAAA 25885 >seq39 Length=1160777 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||| || ||||| || || || || ||| | ||| | || | Sbjct 534923 ATGCAGATCTTCGTAAAAACCCTAACCGGTAAGACCATCACTCTTGAGGTCGAGCCCTCA 534982 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| ||| || || || || || || || || || |||||| Sbjct 534983 GACACTATTGAAAATGTCAAAGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGATCAA 535042 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || ||||| || || ||||| | |||||| |||| ||| | ||||| || Sbjct 535043 CAGCGTCTGATTTTCGCCGGTAAACAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 535102 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || || || || || |||| ||||| | ||| | ||||||||||||| Sbjct 535103 ATCCAGAAGGAGTCTACCCTGCACTTGGTGCTCCGTCTCCGAGGTGGTATTA 535154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755317232176000