Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq112 89.7 9e-13 seq408 86.0 1e-11 >seq112 Length=609800 Score = 89.7 bits (98), Expect = 9e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45617 TTTTGTATCGTAGCATCCCATAAGAAAACTGGATAAAATACCAGACTTGTTACCCTTTCC 45676 |||| |||| ||||||||||||| ||| || ||| || ||| | || || |||| Sbjct 466806 TTTTTTATCTAAGCATCCCATAAGGAAAATGCTTAACATGCCACCTGTTTTTCCGGTTCC 466747 Query 45677 GTAATAAGCACCCAAAACTACTAGATCAGCTTTATCCGCCATAACACATCCATCTAAGTA 45736 || ||||||| | |||||||| ||| || | || ||||| | |||| | ||| Sbjct 466746 ATACCAAGCACCGAGAACTACTAAATCTGCAGTGTCTGCCATTTGTCCTCCAAAGAGGTA 466687 Query 45737 GTCtttttttATTTTCAGCCATCTACGCATACCAGGTTCGTATACACCTTTTGCATCTTT 45796 |||||||| ||||||| ||| | || |||| || | ||| || || ||| ||| Sbjct 466686 ATCTTTTTTAATTTTCATCCAACCTCGTTTACCTGGATGATATTGACTATTCACATTTTT 466627 Query 45797 GAGTACAAACCCTTCTA 45813 ||| || || ||||||| Sbjct 466626 GAGGACTAAGCCTTCTA 466610 >seq408 Length=31413 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496 ||||| || ||| ||||| | | || || ||| | || | |||||| ||||||||| Sbjct 25635 ACTCACGACGATCTCTGGAATTCTGCCCAGATCCAGCTTGTCAAAGAAGGGAAAATGCAT 25576 Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556 | ||||| | ||||| ||||| || || || || ||||||||| | | || ||| | Sbjct 25575 GGCTTTTTGAGGATGTACTGGGCCAAAAAAATTCTCGAATGGACTGAATCTCCAGAACAA 25516 Query 189557 GCTTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAAC 189616 || ||| ||| ||| ||| | ||| | |||||| | || || ||||| || Sbjct 25515 GCATTGGAATATTCTATTTATCTCAACGATAAGTACAGTTTGGATGGACAAGATCCAAAT 25456 Query 189617 GGATACGTAGGT 189628 |||||||||||| Sbjct 25455 GGATACGTAGGT 25444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923027220287800