Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq28 109 6e-19 seq72 107 2e-18 seq2 107 2e-18 seq214 104 3e-17 seq59 104 3e-17 seq24 104 3e-17 seq18 104 3e-17 seq10 95.1 1e-14 >seq28 Length=1376228 Score = 109 bits (120), Expect = 6e-19 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | | |||| |||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 1082091 AAAACTGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1082150 Query 60117 TCACCACTATACTACCGAGGATT 60139 | ||||||||||||||||||||| Sbjct 1082151 TAACCACTATACTACCGAGGATT 1082173 >seq72 Length=833879 Score = 107 bits (118), Expect = 2e-18 Identities = 79/90 (88%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 60056 GAAAAATTTTCTCCTC---GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||||||| || ||||| ||| ||||||||||||| ||||||||||||||||||||| Sbjct 77869 GAAAAATCTTATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGG 77928 Query 60113 ATACTCACCACTATACTACCGAGGA-TTGA 60141 ||||| ||||||||||||||||||| |||| Sbjct 77929 ATACTAACCACTATACTACCGAGGACTTGA 77958 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 90613 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 90554 Query 60126 TACTACCGAGGAT 60138 ||||||||||||| Sbjct 90553 TACTACCGAGGAT 90541 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 80328 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 80269 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 80268 TACTACCGAGGA 80257 >seq2 Length=3528708 Score = 107 bits (118), Expect = 2e-18 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 929959 TTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 929900 Query 60124 TATACTACCGAGGA 60137 |||||||||||||| Sbjct 929899 TATACTACCGAGGA 929886 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1436161 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1436102 Query 60126 TACTACCGAGGAT 60138 ||||||||||||| Sbjct 1436101 TACTACCGAGGAT 1436089 Score = 105 bits (116), Expect = 8e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1497340 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1497399 Query 60126 TACTACCGAGGAT 60138 ||||||||||||| Sbjct 1497400 TACTACCGAGGAT 1497412 Score = 105 bits (116), Expect = 8e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60060 AATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCA 60119 ||| | |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| | Sbjct 3369685 AATGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAA 3369626 Query 60120 CCACTATACTACCGAGGA 60137 |||||||||||||||||| Sbjct 3369625 CCACTATACTACCGAGGA 3369608 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| | ||||||||||||||||||| ||||| |||||| Sbjct 1438739 TCTCCCCGGCGGGGAATCGAACCCCGATCTCCCGCGTGACAGGCGGGGATACTAACCACT 1438680 Query 60125 ATACTACCGAGGAT 60138 |||||||||||||| Sbjct 1438679 ATACTACCGAGGAT 1438666 >seq214 Length=204066 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 175665 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 175724 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 175725 TACTACCGAGGA 175736 >seq59 Length=962314 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 353905 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 353846 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 353845 TACTACCGAGGA 353834 >seq24 Length=1460478 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 939543 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 939484 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 939483 TACTACCGAGGA 939472 >seq18 Length=1847082 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1108602 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1108661 Query 60126 TACTACCGAGGATTG 60140 |||||||||||| || Sbjct 1108662 TACTACCGAGGACTG 1108676 >seq10 Length=2329298 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 253244 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 253303 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 253304 TACTATCGAGGA 253315 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||| || | || ||||| |||| ||| | || ||||||||| || |||||||| | Sbjct 1254106 TCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGA 1254047 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || ||| || | || |||| || ||||| || || |||||||| ||||| || | || Sbjct 1254046 CAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGG 1253987 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||| || ||| || ||| | || | | || ||| | || || Sbjct 1253986 GATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGAC 1253927 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||| |||||||| || | |||||||||||||| |||||| Sbjct 1253926 TTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571712564254600