Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 3e-13 seq39 84.2 1e-11 >seq10 Length=2329298 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 |||||||| || || | ||| ||||| || || ||||| ||||| || ||| | Sbjct 1253181 CTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACCA 1253122 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || |||||||| || || || || || || ||||| || || || | || ||| ||| Sbjct 1253121 TCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTTG 1253062 Query 34295 TCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGAT 34353 || || ||| ||||| | || | || | ||| | | ||| || |||| ||||| Sbjct 1253061 TCTTGAAT-TTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGAT 1253003 Query 34354 GGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTC 34394 || ||||| || ||||||||||| || || |||||| ||| Sbjct 1253002 CGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCATCCCTC 1252962 >seq39 Length=1160777 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | ||| || ||||| |||||||| ||||| || || | || Sbjct 535134 AGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 535075 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| || || |||||||| || ||||| || || ||| | | ||||||||| Sbjct 535074 TCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCC 535015 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||||| | || | || | || | | ||||| || | |||||||| Sbjct 535014 TGGATCTTC-GCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGT 534956 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || ||||| || ||||||||||| Sbjct 534955 CTTACCGGTTAGGGTTTTTACGAAGATCTGCAT 534923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323014139319200