Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3509 123 2e-23 seq3563 118 8e-22 >seq3509 Length=1415 Score = 123 bits (136), Expect = 2e-23 Identities = 203/293 (69%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394 |||||||||||||| |||||| | |||| || | |||||||||| | || | Sbjct 1383 ATTAAAACGAACCCTAACGACCGCCGAATCATCATGACCGCCTGGAACCCAGTCGACATC 1324 Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAA 20454 ||| |||||| | || || || ||| || ||| || || ||||| || || Sbjct 1323 CCTCAGATGGCTCTTCCGCCTTGCCATTGCCTCGTCCAGTTCTATGTTGCAAACGGAGAG 1264 Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514 | ||||| || | ||||| | || || || ||||||||||| || ||||| || || Sbjct 1263 CTATCGTGCCAGCTCTATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATC 1204 Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGAC 20574 || || || || || ||||| || ||| |||| || || |||| || || | || || Sbjct 1203 GCCAGCTACGCCCTTCTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGAT 1144 Query 20575 TTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTT 20627 || ||||| ||| | ||||| || ||| | || || ||||| || ||||| || Sbjct 1143 TTTGTCCATACCTTTGGAGATGCTCATGTATATCTGAATCACATTGAACCGTT 1091 >seq3563 Length=1406 Score = 118 bits (130), Expect = 8e-22 Identities = 202/293 (69%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394 |||||||||||||| |||||| | |||| || | |||||||||| | || | Sbjct 33 ATTAAAACGAACCCTAACGACCGCCGAATCATCATGACCGCCTGGAACCCAGTCGACATC 92 Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAA 20454 ||| |||||| | || || || || || ||| || || ||||| || || Sbjct 93 CCTCAGATGGCTCTTCCGCCTTGCCACTGCCTCGTCCAGTTCTATGTTGCAAACGGAGAG 152 Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514 | ||||| || | ||||| | || || || ||||||||||| || ||||| || || Sbjct 153 CTATCGTGCCAGCTCTATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATC 212 Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGAC 20574 || || || || || ||||| || ||| |||| || || |||| || || | || || Sbjct 213 GCCAGCTACGCCCTTCTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGAT 272 Query 20575 TTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTT 20627 || ||||| ||| | ||||| || ||| | || || ||||| || ||||| || Sbjct 273 TTTGTCCATACCTTTGGAGATGCTCATGTATATCTGAATCACATTGAACCGTT 325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399112508016775