Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq170 109 5e-19 >seq170 Length=322284 Score = 109 bits (120), Expect = 5e-19 Identities = 180/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 |||||||| || |||||||| |||||||| ||||| | ||| || || | |||||| Sbjct 24257 AGATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGT 24198 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 ||||| ||||| || | || ||||| | || | || || | ||| || |||| || Sbjct 24197 TCGTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCA 24138 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || || ||||| |||||||| ||||||||||| || |||| || ||| || || Sbjct 24137 AAACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAA 24078 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 ||| ||| | |||||||| | ||||| |||| || ||||||| | | Sbjct 24077 TTAGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGT 24018 Query 14426 ATTGTTTCAATAGCATTAAA 14445 | |||||||| || || || Sbjct 24017 AAGGTTTCAATTGCGTTGAA 23998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| ||||||||||| || || | || |||| || |||||||| || ||||| || Sbjct 24600 ATAACACCCATTTTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATCA 24541 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGA 13998 ||||| || ||||||| |||||||| |||||||| || Sbjct 24540 AGTGAGATTATTTCCATGAAATCAAAAGGATTTGTCGA 24503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482256999142600