Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 1e-13 >seq10 Length=2329298 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||| || || ||||| || || || || ||| | || ||||| | Sbjct 1254335 ATGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCT 1254394 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| |||| || ||| | ||||||||| | || || ||| Sbjct 1254395 GACACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAG 1254454 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAAC-GATTACAG 25010 |||||||| || | ||| || |||||| |||| ||| || || | | || |||| Sbjct 1254455 CAACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCAC-ATTATCTGACTACAA 1254513 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||||||| | || ||||| || ||| | || |||| |||||| Sbjct 1254514 TATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGGT 1254562 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| |||||||| || || || ||||||||||| || | || || ||| | Sbjct 1254563 ATGCAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCT 1254622 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| |||| || ||| | || |||||| | || |||||| Sbjct 1254623 GACACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAG 1254682 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | ||||| | ||| ||||| ||| ||||||| || | ||| || | | Sbjct 1254683 CAGAGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAAC 1254742 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||| ||| |||| || || || || | || | || |||||| Sbjct 1254743 ATTCAGAAGGAGTCCACTCTCCACTTGGTACTGAGACTTCGTGGAGGT 1254790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418229083714400