Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq13 475 4e-129 seq170 116 5e-21 >seq13 Length=2077869 Score = 475 bits (526), Expect = 4e-129 Identities = 1237/1874 (66%), Gaps = 54/1874 (3%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 || |||||||| || | ||| || || || || ||||||||||| ||||| || || Sbjct 1821396 GTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACCCGTCTTCAGG 1821337 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || || |||| || ||||| || || ||||||| |||| | || ||||| | Sbjct 1821336 CCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGGCTCTGCAACG 1821277 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || ||||| | |||||||||||||| |||||||| || | |||||||||||| | || Sbjct 1821276 TGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGCCATGTGCAT- 1821218 Query 62226 ATCGTCTTTTGTGC--AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || |||| | ||||||||||| || ||||| | | ||||| || || | Sbjct 1821217 -TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATATTCTCCGGGA 1821159 Query 62284 GGTT---TGTATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCAT 62340 || | | | ||||| ||| || | || | ||||| ||||| || || || | Sbjct 1821158 TCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTCATATCTTCGT 1821099 Query 62341 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTC 62400 ||| | | |||||||| | | ||||| |||| || ||| ||||| | Sbjct 1821098 CCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACTATAAATTCAC 1821039 Query 62401 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62460 | || | || | ||| |||||| || ||| || || || | |||||||| || | Sbjct 1821038 CCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTGC 1820979 Query 62461 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62520 | | |||||| | ||| ||||| || ||||| || |||| || || ||| |||| | Sbjct 1820978 CAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAATTCCTAACGC 1820919 Query 62521 CGTA-TGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG------- 62572 | || || | | ||||| || || || | |||| | ||| | || | || Sbjct 1820918 CATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTTG 1820860 Query 62573 TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62632 | | ||| || || || || || || ||| | |||||| | || || Sbjct 1820859 TCCCACATATCG-------TACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGT 1820807 Query 62633 ATCATATGGTCC---TTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATA 62689 || || ||||| ||| || |||||||| || || || || | || ||||| || Sbjct 1820806 TTCGTACGGTCCAAATTCTTT---AGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTA 1820750 Query 62690 AATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATT 62749 ||| |||||||| |||| || ||| | | ||| || ||| ||| || | || ||| Sbjct 1820749 AATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACG 1820690 Query 62750 TAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62809 | ||||| || | || || | ||||| ||||| || || || || | || || | Sbjct 1820689 CATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCAT 1820630 Query 62810 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62869 || || | | ||||||||| || ||||| || |||||||| ||||| || || ||||| Sbjct 1820629 GTTGGACTTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATT 1820570 Query 62870 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---T 62926 || | | ||| || |||||| ||| | || ||| | | || | Sbjct 1820569 CCTCGTCACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCGT 1820510 Query 62927 TACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGC 62986 || ||||||||||| |||| ||| |||| |||||| ||||||| || | || ||| Sbjct 1820509 GACGAACATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGA 1820450 Query 62987 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATT 63046 || | || || || ||||| ||||| ||||| || ||||| || | ||| || || || Sbjct 1820449 GTACTCTACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTT 1820390 Query 63047 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGA 63106 ||||||| |||| || || ||||| || | || | ||||| || || || | |||||| Sbjct 1820389 ACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGA 1820330 Query 63107 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCT 63166 ||| || || || ||| | | ||||| | | ||| | || || | Sbjct 1820329 TTCAATTATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTT 1820270 Query 63167 TTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAA----TCTAG 63222 |||||| || || | |||||| | || ||||| || | | || || || Sbjct 1820269 CTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCCCACACCT---CAAAGAGGTC-AG 1820214 Query 63223 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63282 |||||| || ||||||||||| ||||| ||| | || ||| || | |||||||||| Sbjct 1820213 GACATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGA 1820154 Query 63283 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTAT 63342 |||| |||||||| || || ||||| || | | | || || || || || | Sbjct 1820153 GATCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGT 1820094 Query 63343 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63402 |||| || || | || ||| | | | ||| | |||||| || |||||||| || || | Sbjct 1820093 TCTTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGA 1820034 Query 63403 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63462 | || || ||||| ||||||||||| || | || | || ||| ||| | || | Sbjct 1820033 AGGCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCC 1819974 Query 63463 TCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCC--TCCACT 63520 ||||||| |||| | ||| || ||||| ||||| || || || |||||| ||| | Sbjct 1819973 TCAACATGGGAACGAGACCATTAGATATGCCATTTGTGCC--AGCTATAGCAGTTCCCTT 1819916 Query 63521 GGCACGAATATTACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576 || || ||| ||| || || || ||||| ||||| | || ||||| | | Sbjct 1819915 CGCTCGGATAC----AATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAG 1819860 Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAA 63636 |||| || | | | | |||| || || || ||| |||| |||| | | ||||| Sbjct 1819859 CGCAGCGCTCCACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAA 1819800 Query 63637 AACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 63696 |||| || | ||| ||||| || | || || || || || || || || | Sbjct 1819799 AACACGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAG 1819740 Query 63697 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGA 63755 | || ||||||| ||||| || |||||||| || || || | || ||||| || | Sbjct 1819739 TGAAATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG- 1819681 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 |||||||| |||| || | ||| |||||||||||||||| ||| | ||||| || Sbjct 1819680 TGAATTCCGACTGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTG 1819621 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63875 ||||| || | ||||| |||| | ||||||||| || || |||||||| ||||| Sbjct 1819620 ATTTTTAAAAGATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCG 1819561 Query 63876 CGTTCGTAAATAAT 63889 || ||||||||||| Sbjct 1819560 CGGTCGTAAATAAT 1819547 >seq170 Length=322284 Score = 116 bits (128), Expect = 5e-21 Identities = 189/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 ||| |||| |||||| ||||| |||| ||| ||||||||||| || | ||||| ||||| Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 || || || ||||||||| | | ||| || | || ||||| || | || || || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 33962 TGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 34021 | | ||||||||| || ||||| || ||| || || || || | || ||| || Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 34022 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 34081 || | || || | | || |||||| | ||||| | | || || || | | || Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 34082 TTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 ||| |||||||||||||| || || || |||| Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGCCT 23648 Score = 114 bits (126), Expect = 2e-20 Identities = 188/269 (70%), Gaps = 3/269 (1%) Strand=Plus/Minus Query 33558 TGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTA 33617 |||| | |||||| ||||| ||||| || |||||||| || | || ||||| | Sbjct 24263 TGTACAAGATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGAT 24204 Query 33618 ATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATG 33677 || | |||||| ||||| || || || ||||| | ||| | ||| || ||||| || || Sbjct 24203 ATAAGTTCGTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATT 24144 Query 33678 GAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCT 33737 || || || || ||||||||||| || ||||||||||| ||||| | ||| || Sbjct 24143 GATGCAAAACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCA 24084 Query 33738 CCATAACCGGC--GCTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACA 33794 || || || || | || |||||| ||||| || ||||||||||| ||| Sbjct 24083 CCGAAATTAGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACA 24024 Query 33795 CAAGGCATCGTTTCTATGGCATTAAAGAG 33823 || || | ||||| || || || ||||| Sbjct 24023 CAGGGTAAGGTTTCAATTGCGTTGAAGAG 23995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 |||||| |||||||||||||| || ||||| ||| ||||| || || || || || || Sbjct 24601 CATAACACCCATTTTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATC 24542 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAT 33385 | ||| || |||||||||||||||| ||||| || || |||||| Sbjct 24541 AAGTGAGATTATTTCCATGAAATCAAAAGGATTTGTCGAATGGTAAAT 24494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629701910379600