Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq13 217 1e-51 seq170 156 4e-33 >seq13 Length=2077869 Score = 217 bits (240), Expect = 1e-51 Identities = 916/1432 (64%), Gaps = 31/1432 (2%) Strand=Plus/Minus Query 37183 GTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATT 37242 || || || |||| ||||||||| || | | ||||| || |||||||| || ||||| Sbjct 1821006 GTGTAGGGCTCAAAGGACTCATTGTTGCCAAGAATTTGTGAAGTAGATGCTGTGGGCATC 1820947 Query 37243 GGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTC 37302 || || | || | | ||| || | |||| || ||| ||| || || || | Sbjct 1820946 GGCGCCAATAACAAGGAATTCCTAACGCCATACTGCTTTATTTTCTCCTTAAGCTCCGCC 1820887 Query 37303 CAATCCCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTC 37362 || |||||||||| || || | || ||||||||| || || || || ||||| || Sbjct 1820886 CAGTCCCATAAATTGGTGGGCGTTTTGTCCCACATATCGTACTGGAGTATTCCTTTGCTG 1820827 Query 37363 GCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATT--TTAGCTAGTTCGCAACTAG 37420 | || || | | || || || || ||||| ||||| |||||||||||||| || | Sbjct 1820826 ACCGGCGATCCCTCGTAGGTTTCGTACGGTCC--AAATTCTTTAGCTAGTTCGCAGCTGG 1820769 Query 37421 ATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTT 37480 ||| || || | || || || ||||| ||||| || ||| ||| ||| || || | Sbjct 1820768 CTTCAAGGGCTCCGTAGTAAATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCT 1820709 Query 37481 CGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATAC 37540 |||| ||| | | || | || | || || |||||||| || || ||||| || | Sbjct 1820708 CGCTTTCGTAGGGGTAACGCATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGC 1820649 Query 37541 CTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATAT 37600 | || || | || ||| | || || | | |||| || ||||| || || |||| Sbjct 1820648 CAATCGGGCGGTGCTTCATGTTGGACTTCTTAGCTTCTGGCATCGGATAGTAGTTAATAT 1820589 Query 37601 CTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACA 37660 | || || || |||||||| | | | |||| |||| | |||| || | || | Sbjct 1820588 CGATAATCTTGTTTAGATTCCTCGTCACTGTTTTAGTAACTGCCTTCAATTTCTGGA--A 1820531 Query 37661 TAAATACGTTATTAT------TAACAAATTTACTCAACGAAATAGATCCTAGATTACATA 37714 |||| || || | | || || | |||||| |||||| | | |||||||| Sbjct 1820530 GTCATAC-TTCTTTTCCGGCGTGACGAACATGTTCAACGCAATAGAGGCCAAATTACATA 1820472 Query 37715 CAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAA 37774 | || | ||| || || | | || ||| ||||| || ||||| || || ||| Sbjct 1820471 CGGCTATTTCGTCGGCGGCCGAGTACTCTACAATTTCTGTGCATAGATTGCTACATTTAA 1820412 Query 37775 TTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACG 37834 | || || | ||| || || ||| | || || | || || |||| ||||| | Sbjct 1820411 TAGTCCCGATATTCTGCTGGTTACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAG 1820352 Query 37835 GCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGA 37894 | |||||| |||| |||| || || |||| ||| | || || || || Sbjct 1820351 GAGTTCCTGTCTCTACCTGAGATTCAATTATAGCAAACCACAGCTGCCTGGCCTTCACCT 1820292 Query 37895 TCGCTTTAAtttttttCTTTGTT-TCGTATTCTATATATAATTTGTTAAAATCATTCCCC 37953 || || | | | ||| ||||||| | | |||| | | || | || ||| Sbjct 1820291 TC-CTGTTGGCACGCCCCTCGTTCTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCC 1820233 Query 37954 CATACATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTT 38013 || || || | | | ||||||| ||||||||| | |||||| ||||||||| Sbjct 1820232 CACACCTCAAAGAGGTCAGGACATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCC 1820173 Query 38014 TCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTA 38073 || || | | |||||| | ||| || | ||| | ||| |||||| || | | Sbjct 1820172 TCGACCCTCTTCATAAAGAGATCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGG 1820113 Query 38074 TATTCTTCGTTCCCTACATTCTTTCTTAAGCTT-AGAAAATCGAATATATCAGCGTGCCA 38132 | ||||| | | | | | ||||| || || ||||| || || | ||| || ||||| Sbjct 1820112 TGCTCTTC-TGCGCCAGTGTTCTTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCA 1820054 Query 38133 TGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCT 38192 || || | ||||| | | || || || | ||||| |||||||| | || ||| | Sbjct 1820053 GGGCTCCAAGTAAATAGCGAAGGCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTT 1819994 Query 38193 AACTGTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACC 38252 | ||| ||| | | || ||||| || || | |||||||||| |||| ||| | || Sbjct 1819993 TGCAACGTTGTTAAACACCCTCAACATGGGAACGAGACCATTAGATATGCCATTTGTGCC 1819934 Query 38253 GGATATATAAGTACCCTTAGCTCGTATATTACTTATCGAC----AATCCTATTCCACCTG 38308 | |||| ||| ||||| ||||| ||| || ||| || || ||||| |||| Sbjct 1819933 AGCTATAGCAGTTCCCTTCGCTCGGATA----CAATGGACGTTTAAGCCGATTCCTCCTG 1819878 Query 38309 CATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCAT 38368 | | || || || | |||||| | | | | | || || || || || || || Sbjct 1819877 CGTTCTTCGAGATCATAGCGCAGCGCTCCACAGACTTGAAGATTCCCTCAAT--TG-AAT 1819821 Query 38369 CCTTTA--TTGGT-AGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAA 38425 ||| | |||| | || |||||| || | ||| || | || | || | Sbjct 1819820 CCTCGACCATGGTCAATAGAAAACACGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGA 1819761 Query 38426 ATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTA 38485 | ||||| || |||||||| |||| |||||||||| | || || ||||| ||| Sbjct 1819760 ACAATGTTGGGGATGCATGAGTGAAATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTG 1819701 Query 38486 CATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTC 38545 | |||| ||||| | |||||||| || | || || ||||| | ||| || || |||| Sbjct 1819700 CGGCATCGATATCTTCACCGTGAATTCCGACTGAAACTCTCATCAACATGTGCTGAGGTC 1819641 Query 38546 TTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTT 38597 ||| |||||| ||| ||| | ||||| || |||| | ||||| Sbjct 1819640 GTTCGGCGATTTTACCATTGATTTTTAAAAGATAGGACCTTTCGAGAGTTTT 1819589 >seq170 Length=322284 Score = 156 bits (172), Expect = 4e-33 Identities = 285/411 (69%), Gaps = 11/411 (3%) Strand=Plus/Minus Query 11465 TCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACC 11524 ||||||||||| || || ||||| |||| || || ||||| || ||||||| || Sbjct 24404 TCTGCGACGAACTCGATGTACTGGCACATCAACATGCAGTTCATCCCAATAAGATTTACA 24345 Query 11525 GGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTT 11584 || | || | |||||||| | || ||| || || || || || ||||||| || Sbjct 24344 GGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTTACTGCCTCTGAGATTATCT-CG-- 24288 Query 11585 ATAACTTCCTTAGATGGTGGA----TGTAATAAATGTTTAAACATTAAACACGCAAAATC 11640 |||| ||| | || ||| |||| | |||||| ||||||||||| |||||||| Sbjct 24287 ATAA-TTCGATCCCTGCTGGGCTTCTGTACAAGATGTTTGAACATTAAACAAGCAAAATC 24229 Query 11641 ACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAA 11700 |||||||| |||||||| | ||| ||||| || ||||| || | || ||||| | Sbjct 24228 GCAATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTCAGACCAGGCATAAT 24169 Query 11701 TCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCAC 11760 || | || || | ||| || || | ||||| ||| ||||| |||||||| || Sbjct 24168 GCCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTGAAGAAGATTCCCTCGAC 24109 Query 11761 AGCTGCAAATGCTACTACTCTTTCTCC--ATATACCT-TGTTGCTAGATATCCATTTTCT 11817 || ||||| || | || |||||| || | || || ||||| |||||||| | Sbjct 24108 TGCAGCAAAAGCAATTATTCTTTCACCGAAATTAGCTGACTTGCTTGATATCCAAGCCAT 24049 Query 11818 GGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAA 11868 |||||| ||||| |||||||| || || | ||||| || ||||| || Sbjct 24048 GGCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGGTTTCAATTGCGTTGAA 23998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468438737850800