Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq13 488 7e-133 seq170 122 1e-22 >seq13 Length=2077869 Score = 488 bits (540), Expect = 7e-133 Identities = 1236/1872 (66%), Gaps = 32/1872 (2%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 || |||||||| || | ||| || || || || ||||||||||| ||||| || || Sbjct 1821396 GTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACCCGTCTTCAGG 1821337 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || || |||| || ||||| || || ||||||| |||| | || ||||| | Sbjct 1821336 CCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGGCTCTGCAACG 1821277 Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018 || ||||| | |||||||||||||| |||||||| || | |||||||||||| | || Sbjct 1821276 TGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGCCATGTGCAT- 1821218 Query 65019 ATCGTCTTTTGT--GGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || |||| | ||||||||||| || ||||| | | ||||| || || | Sbjct 1821217 -TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATATTCTCCGGGA 1821159 Query 65077 GGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 65133 || | | | ||||| ||| || | || || ||||| ||||| || || || | Sbjct 1821158 TCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTCATATCTTCGT 1821099 Query 65134 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 65193 ||| | | |||||||| | | ||||| | || || ||| |||||| | Sbjct 1821098 CCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACTATAAATTCAC 1821039 Query 65194 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTC 65253 | || | || | ||| |||||| || ||| || || || | |||||||| || | Sbjct 1821038 CCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTGC 1820979 Query 65254 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 65313 | | |||||| | ||| ||||| || ||||| || |||| || || ||| |||| | Sbjct 1820978 CAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAATTCCTAACGC 1820919 Query 65314 CGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 65372 | || || | | ||||| || || || |||| | ||| | || | || Sbjct 1820918 CATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTTG 1820860 Query 65373 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 65432 || || || || || ||| | |||||| | || || ||||| Sbjct 1820859 TCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGTTTCGTAC 1820800 Query 65433 GGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 65489 ||||| ||| || ||||||||| || || || || | || ||||| ||||| ||| Sbjct 1820799 GGTCCAAATTCTTT---AGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTAAATAGTT 1820743 Query 65490 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 65549 || || |||| || ||| | | ||| || ||| ||| || | || ||| | ||| Sbjct 1820742 TCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACGCATCAGA 1820683 Query 65550 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 65609 || || | || || | ||||| ||||| || || || || | || || | || || Sbjct 1820682 ATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCATGTTGGAC 1820623 Query 65610 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 65669 | | ||||||||| || ||||| || |||||||| ||||| || || ||||| || Sbjct 1820622 TTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATTCCTCGTC 1820563 Query 65670 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTA---TTACAAAC 65726 | | ||| || |||||| ||| | || ||| | || || | || ||| Sbjct 1820562 ACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCGTGACGAAC 1820503 Query 65727 ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGT 65786 |||||||| |||| ||| |||| |||||| ||||||| || | || ||| || | | Sbjct 1820502 ATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTCT 1820443 Query 65787 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 65846 | || || ||||| ||||| ||||| || || || || | ||| || || ||||||||| Sbjct 1820442 ACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTTT 1820383 Query 65847 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 65906 |||| || || ||||| || | || | ||||| || || || | ||||||||| || Sbjct 1820382 CTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGATTCAATT 1820323 Query 65907 ATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTAT 65966 || || ||| | | ||||| | | ||| | | || | |||||| Sbjct 1820322 ATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTTCTCGTAT 1820263 Query 65967 AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCC 66026 ||| || | |||||| | || ||||| || | | ||||||||| || Sbjct 1820262 TTTGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGACATTTATTT 1820203 Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 ||||||||||| ||||| ||| | || ||| || | |||||||||||||| |||||| Sbjct 1820202 GGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGATCCGGAATC 1820143 Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146 || || || |||||| || | | | || || || || || ||||| || || Sbjct 1820142 CAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTCTTCTTCAGG 1820083 Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206 | || ||| | | | ||| |||||| || |||||||| || || | | || || Sbjct 1820082 TTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAGGCCCCGGGA 1820023 Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266 ||||| ||||||||||| || | || | || ||| ||| | || |||||||| ||| Sbjct 1820022 CGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTCAACATGGGA 1819963 Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGC--TTCCACTTGCACGAATAT 66324 | | |||||| ||| | ||||| || || || |||||| |||| | || || ||| Sbjct 1819962 ACGAGACCATTAGATATGCCATTTGTGCC--AGCTATAGCAGTTCCCTTCGCTCGGATAC 1819905 Query 66325 TACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 66380 ||| || || || ||||| ||||| | || ||||| | ||||| || | Sbjct 1819904 ----AATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCAGCGCTCC 1819849 Query 66381 AACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC 66440 | | | |||| ||||| || ||| || | |||| | | ||||||||| || Sbjct 1819848 ACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACACGAGGAG 1819789 Query 66441 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 66500 | ||| |||||| || | || || || || || || || || || || ||||| Sbjct 1819788 AGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAAATATTTT 1819729 Query 66501 TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTAC 66559 || ||||| || |||||||| || || || | || ||||| || | |||||||| || Sbjct 1819728 TCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAATTCCGAC 1819670 Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619 || || | ||| |||||||||||||||| ||| |||| || || ||||| || | Sbjct 1819669 TGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTTTTAAAAG 1819610 Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679 ||||| |||| | ||||||||| || || |||||||| ||||| || |||||||| Sbjct 1819609 ATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGTCGTAAAT 1819550 Query 66680 AATAACCGAGTT 66691 ||| | ||||| Sbjct 1819549 AATTGCTGAGTT 1819538 >seq170 Length=322284 Score = 122 bits (134), Expect = 1e-22 Identities = 185/261 (71%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 36142 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTC 36201 |||||| ||||| ||||| || |||||||| |||| || ||||| | || | ||| Sbjct 24255 ATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTC 24196 Query 36202 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 36261 ||||||||| || || || ||||| | ||| | ||| || ||||| || || || ||||| Sbjct 24195 GTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAA 24136 Query 36262 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 36321 ||| ||||| ||||| || ||||| ||||| ||||| | ||| || || || Sbjct 24135 ACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATT 24076 Query 36322 GGC--ACTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 36378 || ||| | || |||||| ||||| || ||||||||||| ||||| || | Sbjct 24075 AGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAA 24016 Query 36379 TGTCTCTATAGCATTAAAGAG 36399 || || || || || ||||| Sbjct 24015 GGTTTCAATTGCGTTGAAGAG 23995 Score = 107 bits (118), Expect = 3e-18 Identities = 187/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 ||| |||| ||| || || || |||| ||| ||||||||||| || | ||||| ||||| Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || ||||||||| | | ||| || | || || || || | || || || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 36538 TGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 36597 | | ||||||||| || |||||||| ||| || || || || | || ||| || Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 36598 AAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCAC 36657 || | || || | || |||||| | ||||| | | || || || | | || Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 36658 TTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 ||| |||||||||||||| || || || |||| Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGCCT 23648 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/140 (74%), Gaps = 5/140 (4%) Strand=Plus/Minus Query 35811 TTTAAAAATCAACATCTAGAGAAAAA----TGATTGTCTTCTTGAGACATAACTCCCATT 35866 ||||||||||| | || || | |||| || ||| || || |||||| |||||| Sbjct 24647 TTTAAAAATCATCGTCGAGTGTAAAAGCGATGTTTGCCTGGTTCTC-CATAACACCCATT 24589 Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 |||||||| || ||||| ||| ||||| || || || ||||| || | ||| || || Sbjct 24588 TTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATCAAGTGAGATTATT 24529 Query 35927 TCCATGAAATCGAATGGATT 35946 ||||||||||| || ||||| Sbjct 24528 TCCATGAAATCAAAAGGATT 24509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658051901883800