Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq13 522 4e-143 seq170 131 2e-25 >seq13 Length=2077869 Score = 522 bits (578), Expect = 4e-143 Identities = 1245/1870 (67%), Gaps = 28/1870 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 || |||||||| || | ||| || || || || ||||||||||| ||||| || || Sbjct 1821396 GTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACCCGTCTTCAGG 1821337 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || |||| || || || || || ||||||| |||| | || ||||| | Sbjct 1821336 CCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGGCTCTGCAACG 1821277 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || ||||| | |||||||||||||| |||||||| || | |||||||||||| | || Sbjct 1821276 TGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGCCATGTGCAT- 1821218 Query 78898 ATCGTCTTTTGT--GGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || |||| | ||||||||||| || ||||| | | ||||| || || | Sbjct 1821217 -TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATATTCTCCGGGA 1821159 Query 78956 GGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCAT 79012 || | | | ||||| ||| || | || || ||||| ||||| || ||||| | Sbjct 1821158 TCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTCATATCTTCGT 1821099 Query 79013 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 79072 ||| | | |||||||| | | ||||| | || || ||| |||||| | Sbjct 1821098 CCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACTATAAATTCAC 1821039 Query 79073 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTC 79132 | || | || | ||| |||||| || ||| || || || | || ||||| || | Sbjct 1821038 CCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTGC 1820979 Query 79133 CCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 79192 | | |||||| | ||| ||||| || ||||| || |||| || || ||| |||| | Sbjct 1820978 CAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAATTCCTAACGC 1820919 Query 79193 CGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251 | || || | | ||||| || || || |||| ||||| | || | || Sbjct 1820918 CATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTTG 1820860 Query 79252 TTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAA 79311 | ||| | ||| || || || || || || || | ||||| ||| ||||| || Sbjct 1820859 TCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGTTTCGTAC 1820800 Query 79312 GGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCG 79371 ||||| | || |||| ||| || || || || | |||||||| ||||| ||||| Sbjct 1820799 GGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTAAATAGTTTCA 1820740 Query 79372 AAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATA 79431 ||||||| || ||| | | ||| || || ||| || | || ||| | ||||| Sbjct 1820739 AAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACGCATCAGAATG 1820680 Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491 || | || || | ||||| ||||| || || || || | || || | || || | Sbjct 1820679 AATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCATGTTGGACTTC 1820620 Query 79492 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 | ||||||||| || ||||| || |||||||| ||||| || || |||||||| | | Sbjct 1820619 TTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATTCCTCGTCACT 1820560 Query 79552 ACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA----TCGTCCATCTATTACAAACAT 79607 ||| || |||| | ||| | || ||| | | ||| | | || ||||| Sbjct 1820559 GTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCG-TGACGAACAT 1820501 Query 79608 GTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTAT 79667 ||||||||| | ||| |||| |||||| ||||||| || | || ||| || | || Sbjct 1820500 GTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTCTAC 1820441 Query 79668 TATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTT 79727 ||||| ||||| || || ||||| ||||| || || | ||| || || ||||||||| | Sbjct 1820440 AATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTTTCT 1820381 Query 79728 GTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 79787 ||| || || ||||| || | || | ||||| || || || | ||||||||| || || Sbjct 1820380 GTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGATTCAATTAT 1820321 Query 79788 CGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTG 79847 || ||| | | ||||| | | ||| | | || | ||||||| Sbjct 1820320 AGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTTCTCGTATTT 1820261 Query 79848 TGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGG 79907 ||| |||| |||||| | || ||||| || || | ||||||||| | || Sbjct 1820260 TGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGACATTTATTTGG 1820201 Query 79908 ACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCA 79967 ||||||||| ||||| ||| |||| ||| || | |||||||||||||| |||||||| Sbjct 1820200 ACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGATCCGGAATCCA 1820141 Query 79968 AAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 80027 || || ||||| || | | | ||||| || || || ||||| || || | Sbjct 1820140 GAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTCTTCTTCAGGTT 1820081 Query 80028 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 || ||| | | | ||| | |||||| || |||||||| || || | | || || || Sbjct 1820080 CAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAGGCCCCGGGACG 1820021 Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147 ||| ||||||||||| || | || | || ||| ||| | || |||||||| |||| Sbjct 1820020 TTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTCAACATGGGAAC 1819961 Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGC--TTCCACTGGCACGAATATTA 80205 | |||||| ||| | ||||| || || || |||||| |||| | || || ||| Sbjct 1819960 GAGACCATTAGATATGCCATTTGTGCC--AGCTATAGCAGTTCCCTTCGCTCGGATA--- 1819906 Query 80206 CTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 80261 ||| || || || ||||| ||||| | || ||||| | ||||| || | | Sbjct 1819905 -CAATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCAGCGCTCCAC 1819847 Query 80262 CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACAT 80321 | | |||| ||||| || ||| || | |||| | | ||||||||| || | Sbjct 1819846 AGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACACGAGGAGAG 1819787 Query 80322 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 80381 ||| |||||| || | || || || || || || || || || || ||||||| Sbjct 1819786 TTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAAATATTTTTC 1819727 Query 80382 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCG 80440 || || || |||||||| || || || | || ||||| || | |||||||| || | Sbjct 1819726 CGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAATTCCGACTG 1819668 Query 80441 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 80500 || | ||| |||||||||||||||| ||| |||| || ||| ||||| || | | Sbjct 1819667 AAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTTTTAAAAGAT 1819608 Query 80501 AAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 80560 | || |||| | ||||||||| || || |||||||| ||||| || |||||||||| Sbjct 1819607 AGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGTCGTAAATAA 1819548 Query 80561 TAACCGAGTT 80570 | | ||||| Sbjct 1819547 TTGCTGAGTT 1819538 >seq170 Length=322284 Score = 131 bits (144), Expect = 2e-25 Identities = 192/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 ||| |||| |||||| ||||| |||| ||| ||||||||||| || | ||||| ||||| Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || ||||||||| | | ||| || | || ||||| || | || || || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 50340 AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 50399 | | ||||||||| || |||||||| ||| || || || || | || ||| || Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 50400 AAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 50459 || || || || || || |||||| | ||||| | | || || || | | ||| Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 50460 TTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 ||| |||||||||||||| || || || |||| Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGCCT 23648 Score = 127 bits (140), Expect = 3e-24 Identities = 186/261 (71%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 49944 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 50003 |||||| ||||| ||||| || |||||||| || | || ||||| | || ||||| Sbjct 24255 ATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTC 24196 Query 50004 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 50063 ||||||||| || || || ||||| | ||| | ||| || ||||| || || || ||||| Sbjct 24195 GTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAA 24136 Query 50064 TGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACT 50123 ||| ||||||||||| || ||||| ||||| |||| | ||| || || || | Sbjct 24135 ACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATT 24076 Query 50124 GGC--GCTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 50180 || || | || |||||| ||||| || ||||||||||| ||||| || | Sbjct 24075 AGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAA 24016 Query 50181 CGTTTCTATGGCATTAAAGAG 50201 ||||| || || || ||||| Sbjct 24015 GGTTTCAATTGCGTTGAAGAG 23995 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 |||||| |||||||||||||| || ||||| ||| ||||| || || || || || || Sbjct 24601 CATAACACCCATTTTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATC 24542 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGT 49751 | ||| || |||||||||||||||| ||||| || Sbjct 24541 AAGTGAGATTATTTCCATGAAATCAAAAGGATTTGT 24506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718136862999800