Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq13 462 3e-125 seq170 122 1e-22 >seq13 Length=2077869 Score = 462 bits (512), Expect = 3e-125 Identities = 1223/1861 (66%), Gaps = 28/1861 (2%) Strand=Plus/Minus Query 70801 GTAAACTGAATGGGAGAGGATGC-GGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAG 70859 ||||| ||||| || | ||| |||||| || || ||||||||||| || || || || Sbjct 1821396 GTAAATTGAATTGGTTGTGCTGCTGGCTTT-GTTCGGAGATAGTACATACCCGTCTTCAG 1821338 Query 70860 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTAT 70919 || || |||| || ||||| || || ||||||| ||| | || || || | Sbjct 1821337 GCCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGGCTCTGCAAC 1821278 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 ||||||||| | ||| ||||||||||| |||||||| || | |||||||||||| | || Sbjct 1821277 GTGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGCCATGTGCAT 1821218 Query 70980 GATCGTCTTTTGT--GGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 71037 | || |||| | ||||||||||| || ||||| | | ||||| || || Sbjct 1821217 --TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATATTCTCCGGG 1821160 Query 71038 AGGTT---TGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCA 71094 | || | | | ||||| ||| || | || || ||||| || || || ||||| Sbjct 1821159 ATCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTCATATCTTCG 1821100 Query 71095 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCT 71154 | ||| | | |||||||| | | ||||| | || || ||| |||||| Sbjct 1821099 TCCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACTATAAATTCA 1821040 Query 71155 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTT 71214 || || | || | |||| |||||| || ||| || || || | |||||||| || Sbjct 1821039 CCCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTG 1820980 Query 71215 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGA 71274 || | |||||| | ||| ||||| || ||||| || |||| || | ||| |||| Sbjct 1820979 CCAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAATTCCTAACG 1820920 Query 71275 CCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAAC 71333 |||| || | ||||| || || || |||| | ||| | || | || Sbjct 1820919 CCATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTT 1820861 Query 71334 NNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTATCGTA 71393 || || || || | ||||| | || || ||||| Sbjct 1820860 GTCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGTTTCGTA 1820801 Query 71394 TGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTC 71453 ||||| || || |||||||| || || || || | ||||| || ||||| ||||| Sbjct 1820800 CGGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTAAATAGTTTC 1820741 Query 71454 GAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAAT 71513 ||||||| || ||| | | ||| || ||| ||| || | || ||| | ||||| Sbjct 1820740 AAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACGCATCAGAAT 1820681 Query 71514 AAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAAT 71573 || | || || | ||||| || || || || || || | ||| || | || || | Sbjct 1820680 GAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCATGTTGGACTT 1820621 Query 71574 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTAT 71633 | ||||||||| || ||||| || |||||||| ||||| || || ||||| || | Sbjct 1820620 CTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATTCCTCGTCAC 1820561 Query 71634 TACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACAC 71690 | ||| || |||| | ||| | || ||| | || || | || |||| Sbjct 1820560 TGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCGTGACGAACAT 1820501 Query 71691 GTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTAT 71750 |||||| |||| ||| |||| |||||| ||||||| || | || | | || | || Sbjct 1820500 GTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTCTAC 1820441 Query 71751 AATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTT 71810 |||||| ||||| ||||| ||||| || || || || | ||| || || ||||||||| | Sbjct 1820440 AATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTTTCT 1820381 Query 71811 GTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAAT 71870 ||| || || ||||| || | ||| | ||||| || || || | ||||||||| || || Sbjct 1820380 GTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGATTCAATTAT 1820321 Query 71871 CGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTG 71930 || ||| | | ||||| | | | ||| | | || | ||||||| Sbjct 1820320 AGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTTCTCGTATTT 1820261 Query 71931 TGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGG 71990 ||| |||| |||||| | || ||||| | | | ||||||||| ||| || Sbjct 1820260 TGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGACATTTATTTGG 1820201 Query 71991 ACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCA 72050 ||||||||| ||||| ||| |||| | | || | |||||||||||||| |||||||| Sbjct 1820200 ACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGATCCGGAATCCA 1820141 Query 72051 AAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 72110 || || ||||| || | | | ||||| || || || ||||| || || | Sbjct 1820140 GAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTCTTCTTCAGGTT 1820081 Query 72111 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCG 72170 || ||| | | | ||| | |||||| || |||||||| || || | | || || || Sbjct 1820080 CAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAGGCCCCGGGACG 1820021 Query 72171 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 72230 ||| ||||||||||| || | || | || ||| ||| | || |||||||| |||| Sbjct 1820020 TTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTCAACATGGGAAC 1819961 Query 72231 AATACCATTGGATGCACCATTGGTCCCGGAGATATAGC--TTCCACTGGCACGAATATTG 72288 | |||||| ||| ||||| || || || |||||| |||| | || || ||| Sbjct 1819960 GAGACCATTAGATATGCCATTTGTGCC--AGCTATAGCAGTTCCCTTCGCTCGGATA--- 1819906 Query 72289 CTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA 72344 ||| || || || ||||| ||||| | || ||||| | ||||| || | | Sbjct 1819905 -CAATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCAGCGCTCCAC 1819847 Query 72345 CGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACAT 72404 | | |||| ||||| || ||| || | |||| | | ||||||||| || | Sbjct 1819846 AGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACACGAGGAGAG 1819787 Query 72405 TTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 72464 ||| |||||| || | || || || || || || || || || || ||||||| Sbjct 1819786 TTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAAATATTTTTC 1819727 Query 72465 AGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGTATTCCTACCG 72523 || || || |||||||| || || || | || ||||| || | || ||||| || | Sbjct 1819726 CGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAATTCCGACTG 1819668 Query 72524 CGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 72583 || | ||| ||||| |||||||||| ||| |||| || ||| ||||| || | | Sbjct 1819667 AAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTTTTAAAAGAT 1819608 Query 72584 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 72643 |||| |||| | ||||||||| || || |||||||| ||||| || |||||||||| Sbjct 1819607 AGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGTCGTAAATAA 1819548 Query 72644 T 72644 | Sbjct 1819547 T 1819547 >seq170 Length=322284 Score = 122 bits (134), Expect = 1e-22 Identities = 185/261 (71%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 42049 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTC 42108 |||||| ||||| ||||| || |||||||| || | || || || | || | ||| Sbjct 24255 ATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTC 24196 Query 42109 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAA 42168 ||||||||| || || || ||||| | ||| | ||| || ||||| || || || ||||| Sbjct 24195 GTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAA 24136 Query 42169 TGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACC 42228 ||| ||||||||||| || ||||| ||||| ||||| | ||| || || || Sbjct 24135 ACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATT 24076 Query 42229 GGC--ACTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 42285 || ||| | || |||||| ||||| || ||||||||||| ||||| || | Sbjct 24075 AGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAA 24016 Query 42286 CGTTTCTATGGCATTAAAGAG 42306 ||||| || || || ||||| Sbjct 24015 GGTTTCAATTGCGTTGAAGAG 23995 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 |||||| |||||||||||||| || ||||| ||| ||||| || || ||||| || || Sbjct 24601 CATAACACCCATTTTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATC 24542 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGT 41856 | ||| || |||||||||||||||| ||||| || Sbjct 24541 AAGTGAGATTATTTCCATGAAATCAAAAGGATTTGT 24506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671015920118200