Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq13 138 2e-27 seq3563 105 1e-17 seq3509 105 1e-17 seq49 89.7 8e-13 >seq13 Length=2077869 Score = 138 bits (152), Expect = 2e-27 Identities = 870/1380 (63%), Gaps = 42/1380 (3%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || |||||||| || || || | || | |||||||| || ||||| || || Sbjct 1820006 CAGGGAGGAAATAAACGTCCCGGGGCCTTCGCTATTTACTTGGAGCCCTGGCATGCAGAT 1820065 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| ||| | | || || ||| ||||| |||||| || || | ||| Sbjct 1820066 GTCTTTGAGTTTCTGAACCTGAAGAAGAACACTGGCGCAGAAGAGCACCGTGCTCGCGAC 1820125 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 || ||||| ||||||||| | || ||| | || |||||| | ||| | | | || || Sbjct 1820126 TTATTTTACGCACTCTGGATTCCGGATCTCTTTATGAAGAGGGTCGAGGCAGATGAAGAC 1820185 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 ||| | ||||| || | | || | || | || ||||| || | || Sbjct 1820186 TGGTCTTTGATGTGTCCAAATAAATGTCCTGACCTCTTTGAGGTGTGGGGTGATAAATTC 1820245 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGA 97175 || | ||||| |||||| | ||||| || | || || | || | Sbjct 1820246 GAAGAGCTATACACAAAATACGAGAACGAGGGGCGTGCCAACAGGAAGGTGAAGGCCAGG 1820305 Query 97176 GAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTAC 97235 | |||||| || || | ||||||||||||| |||||||| || || | ||| Sbjct 1820306 CAGCTGTGGTTTGCTATAATTGAATCTCAGGTAGAGACAGGAACTCCTTATATGTTATAC 1820365 Query 97236 AAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAAT 97295 ||||| | || | || || ||||| | | | || || || || | |||| Sbjct 1820366 AAGGACGCATGCAACAGAAAGAGTAACCAGCAGAATATCGGGACTATTAAATGTAGCAAT 1820425 Query 97296 CTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCA 97355 || ||||| ||||||||||||||| | | | ||||| | || || || | |||| Sbjct 1820426 CTATGCACAGAAATTGTAGAGTACTCGGCCGCCGACGAAATAGCCGTATGTAATTTGGCC 1820485 Query 97356 TCGGTCAATCTGCCCAAGTTTGTAGAG--GGTAAAGT-GTTTAATCTCAACCTATTGGCA 97412 || | || || ||| || | || |||| || | | || | |||| Sbjct 1820486 TCTATTGCGTTGAACATGTTCGTCACGCCGGAAAAGAAGTATGACTTCCAGAAATTG--- 1820542 Query 97413 AAGACGGTGCGTCTG---GTGACTAGGAATCTAAACAAGATTATCGACAATGCACT-CTA 97468 ||| | || | ||||| ||||||||||||||||||||||| | | ||| ||| Sbjct 1820543 AAGGCAGTTACTAAAACAGTGACGAGGAATCTAAACAAGATTATCGATATTA-ACTACTA 1820601 Query 97469 TCCCATTCCCTCGGCTGCCAAGTCAAACTTTAAGCACCGACCCATCGGTATAGGAGTGCA 97528 ||| || || ||| ||||| ||| | |||||||| || || || ||||| ||||| Sbjct 1820602 TCCGATGCCAGAAGCTAAGAAGTCCAACATGAAGCACCGCCCGATTGGCATAGGTGTGCA 1820661 Query 97529 AGGCTACGCAGACGCTCTGGCCATGATGGGTATAGCCTACGA------GGA--CTCGATG 97580 |||| || || | | ||||| || ||||||| ||| ||| | Sbjct 1820662 AGGCATGGCTGATACATTCATTCTGATGCGTTACCCCTACGAAAGCGAGGAGGCTCAAA- 1820720 Query 97581 CAGTTGAATCGTGACATTTTCGAAACCATCTACCATGCAGCACTGACGGAGAGTTGCCAA 97640 | ||||||| | ||||| ||||| || ||| | | ||| || | || ||| || Sbjct 1820721 -AATTGAATCAGCAGATTTTTGAAACTATTTACTACGGAGCCCTTGAAGCCAGCTGCGAA 1820779 Query 97641 CTGGCCAGAGTGCACGGAGTCTACGAATCGTACCACGGTAGCCCGACCAGTCGTGGAGAG 97700 || || | || ||| |||||| | ||| | || ||| ||| ||| Sbjct 1820780 CTAGCTAAAGAATTTGGACCGTACGAAACCTACGAGGGATCGCCGGTCAGCAAAGGAATA 1820839 Query 97701 TTGCACTTCGACCGATACTCGGTGCACA--GCCAA--AAGT---GTGACTGGTCATCG-T 97752 | || | ||| || || || | ||| | || | | |||||| | | | Sbjct 1820840 CTCCAGTACGA----TATGTGGGACAAAACGCCCACCAATTTATGGGACTGGGCGGAGCT 1820895 Query 97753 TGCGCAAAGACATTGCTCGGTACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCA 97812 | | | | | || | ||| || | || || || ||| | |||| |||||||||| Sbjct 1820896 TAAGGAGAAA-ATAAAGCAGTATGGCGTTAGGAATTCCTTGTTATTGGCGCCGATGCCCA 1820954 Query 97813 CGGCTACCACTTCCCAAGTGTTTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACA 97872 | || | ||||| ||| | ||||||| ||| || ||||| || | ||| || |||| Sbjct 1820955 CAGCATCTACTTCACAAATTCTTGGCAACAATGAGTCCTTTGAGCCCTACACCTCGAACA 1821014 Query 97873 TGTACCAGAGACGCACCCAGTCTGGAGAGTTTCAATTGACCAACGTGCA-CTTGGTTCGA 97931 | ||||| | || | || || || ||| | | ||| || ||| || | Sbjct 1821015 TTTACCATCGTCGTGTGCTTTCGGGTGAATTTATAGTCGTAAACCACCATCTT--TTGGC 1821072 Query 97932 -GACTTGGAACGG--CTCAATCTGTGGAACGATGACATGGCCCAGTTGATCATGTACAAC 97988 ||||| ||| | || |||| ||| |||| || ||| | || || ||| Sbjct 1821073 CGACTT--AACCGAACTGGATCTTTGGGACGAAGATATGAAGAACGCTATTATAGCCAAT 1821130 Query 97989 AATGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGAATCTACAAGACT 98048 | || ||| |||| |||| | |||||||| | | || | ||||| ||||| Sbjct 1821131 AGAGGTTCCGTTCAGGACATAGAGAAGATCCCGGAGAATATTCGGATGATCTATAAGACC 1821190 Query 98049 GTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATT 98108 || ||||| ||| || || || | || | |||||||| ||| | |||| || |||| Sbjct 1821191 GTTTGGGAAATTTCGGTTAAAACACAAATGCACATGGCTGCAGACCGTGGTGCCTTCATT 1821250 Query 98109 GACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCG 98168 || || ||||||||||||||| | ||||||| ||||||| || | | | || | Sbjct 1821251 GATCAAAGTCAATCGTTCAATATTCACGTTGCAGAGCCCAATTATGGACTGCTAACGAAG 1821310 Query 98169 ATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAG 98228 || |||||||| | ||||| |||||| |||||||| ||||||||||| |||||||| Sbjct 1821311 ATCCACTTTTATGGCTGGAAGCTGGGCCTGAAGACGGGTATGTACTATCTCCGAACAAAG 1821370 >seq3563 Length=1406 Score = 105 bits (116), Expect = 1e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 70319 TATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATG 70378 ||||||||| |||||||||||| || || || || |||||||| || ||||| | | Sbjct 168 TATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTACGCCCTT 227 Query 70379 TTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATT 70438 | || ||||| |||||||| | || ||| |||| | || || || || ||| || Sbjct 228 CTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGATTTTGTCCATACCTTT 287 Query 70439 GGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAG 70498 || || ||||| || ||| | |||||||| || || || | | ||| || || | | Sbjct 288 GGAGATGCTCATGTATATCTGAATCACATTGAACCGTTGCAAGAGCAGCTTAAAAGAGTT 347 Query 70499 CCGAGACCTTTTCCCAAGCTG 70519 ||||| |||||||| || ||| Sbjct 348 CCGAGGCCTTTTCCGAAACTG 368 >seq3509 Length=1415 Score = 105 bits (116), Expect = 1e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 70319 TATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATG 70378 ||||||||| |||||||||||| || || || || |||||||| || ||||| | | Sbjct 1248 TATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTACGCCCTT 1189 Query 70379 TTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATT 70438 | || ||||| |||||||| | || ||| |||| | || || || || ||| || Sbjct 1188 CTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGATTTTGTCCATACCTTT 1129 Query 70439 GGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAG 70498 || || ||||| || ||| | |||||||| || || || | | ||| || || | | Sbjct 1128 GGAGATGCTCATGTATATCTGAATCACATTGAACCGTTGCAAGAGCAGCTTAAAAGAGTT 1069 Query 70499 CCGAGACCTTTTCCCAAGCTG 70519 ||||| |||||||| || ||| Sbjct 1068 CCGAGGCCTTTTCCGAAACTG 1048 >seq49 Length=1022242 Score = 89.7 bits (98), Expect = 8e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 134242 TCACAAATCAGTTGTGCGATGCGATCACCCTTTGACACTACAAAGTCGTCATCGGAATGG 134301 || ||||||||||| || || | || ||| | |||| |||||||| ||||||||||| Sbjct 653668 TCGCAAATCAGTTGGGCAATCCTGTCGCCCCTCTTCACTTCAAAGTCGGCATCGGAATGG 653609 Query 134302 TTAAAGAGGACCACTCCAATGTTTCCAGTATAGTCGCGGTCCACGACACCGGCTCCGACG 134361 || || || || || || | ||| ||| || || |||||| || || ||||| || Sbjct 653608 TTGAAAAGCACTACACCTAAGTTCCCACGGTAATCCTCGTCCACAACGCCCGCTCCAACA 653549 Query 134362 TCGATTCCGTACTTGGCTGCCAGTTTGGATCGCGGAGCAATCCTACCGTAGCAACCTTCC 134421 ||||| | ||| | ||||| || ||||| || | || ||||| |||||||| Sbjct 653548 TCGATGAAATTCTTCACAGCCAGCCCAGACCGCGGGGCGACTCTTCCGTAAGAACCTTCC 653489 Query 134422 GG 134423 || Sbjct 653488 GG 653487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740923076688200