Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq10 120 2e-22 seq44 96.9 3e-15 >seq10 Length=2329298 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||||||| | || | ||||||||| || |||||||| || ||||||||| Sbjct 1253193 CCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAG 1253134 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | || || || ||||| ||||| | || | ||| ||||| || |||| Sbjct 1253133 AGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGA 1253074 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || || |||||||| |||||| ||| || ||| | || || ||||| ||| || Sbjct 1253073 ATGCCCTCTTTGTCTTGAATTTTAGCT-TTCACATTCTCAATTGTATCAGAGGGTTCAAC 1253015 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || || || || || |||||||| || ||||||||||| Sbjct 1253014 TTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210 || ||||||||| || ||||| || || || ||||| || ||| ||| | | | || Sbjct 1253407 TAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCATC 1253348 Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270 || | ||||| ||||| | |||||||| ||||| || ||||| |||||||| || Sbjct 1253347 CTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATC 1253288 Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| || ||| |||| || ||||| | || || ||||| ||||| || Sbjct 1253287 TTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGT 1253228 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || ||||| |||||||||||||| |||||| Sbjct 1253227 TTTCCCAGTCAGTGTTTTTACAAAAATCTGCATA 1253194 Score = 118 bits (130), Expect = 8e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || |||||||| || ||||| || || ||||| || || | | | | || || Sbjct 1254543 ACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGCCCATCCTCC 1254484 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| ||||| | ||||||||||| || || |||||| ||||||||||| | Sbjct 1254483 AATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 1254424 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||||||| |||| || || || || || || ||||| ||||| || Sbjct 1254423 ATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGATGGTCTTC 1254364 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || | ||| |||||||||||||||||| Sbjct 1254363 CCAGTTAAAGTCTTTACAAAAATTTGCATA 1254334 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| ||||| || || ||||| ||||| ||||| || | | | |||||| Sbjct 1252947 ACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCT 1252888 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | ||||||||||| | ||||| | ||| ||||| |||||||| ||||| || | Sbjct 1252887 AGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGA 1252828 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || || ||| || |||| |||||||| | || || || ||||| || ||||| Sbjct 1252827 ATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTG 1252768 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||||| || || || ||||| || ||||| || Sbjct 1252767 CCTGTTAGTGTCTTCACAAAGATCTGCATTTT 1252736 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||||| |||||| || || || ||||| |||||||||||| | | | | | ||||| Sbjct 1253860 AACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCTTC 1253801 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || || || || || | ||||| ||||| || || |||||| ||||||||||| Sbjct 1253800 CAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCCTG 1253741 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| ||| | || || ||||| ||| || || || ||||| || || Sbjct 1253740 GATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTCTT 1253681 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| |||| ||| || || ||||| ||||| Sbjct 1253680 ACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | ||| | || | ||| | ||| || || || || ||||| |||||| Sbjct 1255245 CCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGAC 1255186 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | || || | |||||| || || | ||||||||||| || || ||| Sbjct 1255185 AGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGA 1255126 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||| || || ||||| ||| ||| |||| |||||||| | ||| || Sbjct 1255125 ATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACT 1255066 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || |||||||| |||| || || |||||||| ||||| Sbjct 1255065 TCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCAT 1255019 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || || || || || ||||| || |||||||| || | | | ||||| Sbjct 1254315 ACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCC 1254256 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||| || ||||| | || | |||||| || || ||||||||||| || || | Sbjct 1254255 AATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGA 1254196 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 ||||| ||| ||| |||| ||||||||| ||| || || || || || |||||| Sbjct 1254195 ATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTA 1254136 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| |||||| || || || ||||| Sbjct 1254135 CCAGTCAAAGTTTTCACGAAGATCTGCAT 1254107 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || |||||||| || || || || || ||||| || | | | || || Sbjct 1253631 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCC 1253572 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| ||||| | || | ||||| || || ||||||||||| || || | Sbjct 1253571 AATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGA 1253512 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||||| ||| ||| |||| || || || | ||| || || || || || ||||| Sbjct 1253511 ATCTTTGC-CTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTT 1253453 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||||||| || ||||| |||||| Sbjct 1253452 GCCAGTAAGAGTTTTCACGAAAATCTGCATA 1253422 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || ||||| || ||||| || || || ||||| || ||| | | | | ||||||| Sbjct 1254999 ACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCC 1254940 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 ||||| || ||||| | || | ||||||||| || ||||| ||||||||||| | Sbjct 1254939 AATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGA 1254880 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| || | || || || || ||| || || || || || ||||| Sbjct 1254879 ATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTG 1254820 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || | ||| || || || ||||||||| Sbjct 1254819 CCGGTTAAAGTCTTCACGAAGATTTGCATA 1254790 >seq44 Length=1094211 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || || ||||| || || ||||| || ||||| ||| || | | | || || Sbjct 805550 ACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTCC 805491 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 |||||||| ||||| | |||| ||||||||| || ||||| |||||||| || | Sbjct 805490 AATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTGA 805431 Query 15275 AT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || |||||| || ||| |||| || ||||| ||| || || | || ||||| || Sbjct 805430 ATCTTTGCT-TTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCTT 805372 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || ||||| ||||||||||| Sbjct 805371 GCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362114335402995