Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq10 118 8e-22 seq44 105 5e-18 >seq10 Length=2329298 Score = 118 bits (130), Expect = 8e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||| || | | |||||| || || || |||||| || ||||| || || Sbjct 1254562 ACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGA 1254503 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 |||| ||| |||| ||||||||||| || ||||| ||||| |||||||| || | || Sbjct 1254502 TAATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGG 1254443 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||||| ||| ||| || || || | ||| ||| || | ||||| || Sbjct 1254442 AATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGAC 1254383 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || ||||||||||| ||||| |||||||| Sbjct 1254382 TTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||||||||||||||| | ||| | ||| || || ||||||||| ||||| |||||| Sbjct 1253194 ACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGA 1253135 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | | ||| |||| ||||| |||||||| ||||| || | || || || || | || Sbjct 1253134 GAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGG 1253075 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || ||||| ||| |||||| ||| || | ||| ||||| | || || || Sbjct 1253074 AATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAAC 1253015 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || || | ||| ||||| || |||||||| Sbjct 1253014 TTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||| || || ||| ||| || |||||||||||||| ||| ||| |||| ||| Sbjct 1253631 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCC 1253572 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 |||||||| || ||||| || | |||||||| || |||| | ||||| |||||| | Sbjct 1253571 AATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGA 1253512 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || ||| || || | ||| ||| || | || || || || | || || ||||| Sbjct 1253511 ATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTG 1253452 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | ||| ||||| || || ||||| Sbjct 1253451 CCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 ||||||||||| || ||| |||||||| |||||||| | || |||| || Sbjct 1252947 ACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCT 1252888 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||||| || ||||| ||||| | ||||||||| |||| | || |||||||| | Sbjct 1252887 AGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGA 1252828 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || || || | ||| ||||| | ||||| || || | || || ||||| Sbjct 1252827 ATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTG 1252768 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || |||| ||||||||||| || ||||| Sbjct 1252767 CCTGTTAGTGTCTTCACAAAGATCTGCAT 1252739 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 || |||||||| ||| || || ||||| ||||| ||| | ||| |||| || Sbjct 1253403 ACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCATCCTCA 1253344 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||||| || ||||| ||||| || || || || |||| | ||||||||||||| Sbjct 1253343 AGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATCTTGG 1253284 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| ||| || | ||| ||||| | ||||| || || | ||||||||||| Sbjct 1253283 ATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGTTTTC 1253224 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | || || ||||| || ||||| Sbjct 1253223 CCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || ||| || || || || ||||| ||| || || | || ||| Sbjct 1254999 ACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCC 1254940 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 ||||| || || ||||| || | ||||| || || |||| | |||||||| || | Sbjct 1254939 AATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGA 1254880 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || || || | ||| || |||| ||| || || || | || || ||||| Sbjct 1254879 ATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTG 1254820 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||||||||||||||| || |||||||| Sbjct 1254819 CCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 43930 CTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTCCAATTGTTTTCCTGCAA 43988 ||| || || || ||||||||| | | || || |||| || | |||||| || |||| Sbjct 1255210 CTCCTTCTGGATGTTATAATCGGACAGAGTGCGGC-CATCCTCGAGTTGTTTACCGGCAA 1255152 Query 43989 ATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCA 44048 | ||||| |||||||| || |||| | ||||| ||||| ||||| ||||| Sbjct 1255151 AAATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGATTTTAGCCTTGACAT 1255092 Query 44049 TAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCA 44108 | ||| ||||| | || || || || | || || |||||||| || || ||||||| Sbjct 1255091 TTTCAATGGTATCAGAAGGTTCAACTTCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCA 1255032 Query 44109 CAAATATTTGCAT 44121 |||| || ||||| Sbjct 1255031 CAAAAATCTGCAT 1255019 >seq44 Length=1094211 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 |||||| || || || || ||||| ||||| || ||| | | ||| |||| || Sbjct 805551 CACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTC 805492 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 ||||||||| || ||||| |||| ||||| || || | || | ||||||||||||| Sbjct 805491 CAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTG 805432 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||| ||| |||||| | ||| |||||| | || || || || | || || || || Sbjct 805431 AATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCTT 805372 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || |||| ||||| || || ||||||||| Sbjct 805371 GCCCGTTAGGGTCTTTACGAAAATTTGCATG 805341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354714060994860