Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq10 114 1e-20 seq44 82.4 6e-11 >seq10 Length=2329298 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || |||| ||| | ||| || ||||| |||||||| || ||||||||| Sbjct 1253193 CCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGG-- 1253136 Query 20042 ATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | || ||| ||||| ||||| || ||| | ||||| | ||||||||| | Sbjct 1253135 AGAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTG 1253076 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||| |||||||| |||||| |||||| | ||| | ||| ||||| Sbjct 1253075 GAATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAA 1253016 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||| || || ||||| || | ||||| || ||||||||||| Sbjct 1253015 CTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| || | |||| ||||| || || || || || || || ||||| || ||| Sbjct 1254789 CCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGG-- 1254732 Query 20042 ATAGTTTTAGAA--TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | | ||||||||||| ||||| ||| |||| | ||||| || || || Sbjct 1254731 AAAGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGG 1254672 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||| || || ||| || ||||| | ||| || || |||||| Sbjct 1254671 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAA 1254612 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| |||||||| |||||||| || |||||||| ||||| Sbjct 1254611 CTTCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 >seq44 Length=1094211 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || || || ||||| ||||| || ||||| ||| || || | ||| || Sbjct 805551 CACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTC 805492 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 ||||||||| || ||| | || || | |||||||| ||| | |||||||| || Sbjct 805491 CAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTG 805432 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||| ||| ||| || | ||| || ||| ||||| || | || ||||| || Sbjct 805431 AATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCTT 805372 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| || | || || || ||||||||||| Sbjct 805371 GCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419512053899295