Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq10 188 2e-42 seq44 149 1e-30 seq408 114 3e-20 >seq10 Length=2329298 Score = 188 bits (208), Expect = 2e-42 Identities = 169/212 (80%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || |||| ||||| || ||||| |||||||| |||||||| || ||||| | ||| || Sbjct 1253406 AGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCATCC 1253347 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || ||||| ||||||||||| | | ||||||||| ||||| || ||||||||||| Sbjct 1253346 TCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATCT 1253287 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || || || ||||| |||||||| | ||||| ||| || || |||| |||||| || Sbjct 1253286 TGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGTT 1253227 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| |||||||||||||| |||||||| Sbjct 1253226 TTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 167 bits (184), Expect = 5e-36 Identities = 169/220 (77%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||||| || || || || ||||| ||||| ||||| || || | ||| || Sbjct 1252951 AAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATC 1252892 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 |||||| ||||| |||||||| || | || || || || ||||| ||||| |||||||| Sbjct 1252891 TTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATC 1252832 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || || ||||| | |||||| ||| || || || | || ||||| Sbjct 1252831 CTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGT 1252772 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGT 104566 || || || ||||| || ||||| ||||||||||||||| Sbjct 1252771 TTTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTTGTGT 1252732 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||||| | || | || || || |||||||||||||| ||| Sbjct 1253652 ATTCCACCCCGGAGACGTAGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCA 1253593 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || || || | |||||| |||||||| || || | || ||||| ||| Sbjct 1253592 GATAAGGTACGGCCATCCTCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGA 1253533 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || |||||||| ||||| ||||||||||| || |||||||| | || || |||||| Sbjct 1253532 GGAATTCCTTCCTTATCTTGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCA 1253473 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | ||| || || || |||||||| ||||| || || |||||||| Sbjct 1253472 ACTTCCAATGTGATCGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 154 bits (170), Expect = 3e-32 Identities = 153/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| || |||||||| || ||||| || || | || ||||| | ||| |||||| Sbjct 1254303 GTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCCAATTGCTTTCCA 1254244 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | || ||||| || || |||||||| ||||||||||| || || || Sbjct 1254243 GCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATTTTAGCCTTA 1254184 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||||||| ||||| || || | ||| || || |||||||| | ||| Sbjct 1254183 ACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTACCAGTCAAAGTT 1254124 Query 104543 TTTACAAATATCTGCATT 104560 || || || ||||||||| Sbjct 1254123 TTCACGAAGATCTGCATT 1254106 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || ||||| | || | || || || |||||||| |||||||| || || || | Sbjct 1254780 AGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTGCGT 1254721 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| | ||| || ||||||||||||| ||||| || || || || || ||||| Sbjct 1254720 CCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCTTCC 1254661 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||||||||| || || |||||||| | || || |||||| || || | ||| Sbjct 1254660 TTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAAGTA 1254601 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || ||||| | || || ||||| |||||||| Sbjct 1254600 ATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| | || || || ||||| | ||||| ||||| || ||||| || || Sbjct 1253196 ATACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCG 1253137 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | ||| || || | |||||||||||||| || || | ||||||||| || Sbjct 1253136 GAGAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGT 1253077 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || ||||| || ||||| || ||||| ||||| || | ||||| ||||| Sbjct 1253076 GGAATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCA 1253017 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || ||||| |||||||| ||||| || || || ||||| Sbjct 1253016 ACTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 136 bits (150), Expect = 9e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | |||||| | ||| | || ||||| ||||| || |||||||| Sbjct 1255020 ATTCCACCACGGAGGCGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCG 1254961 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | ||| | ||||||||| | ||| || |||||||| || || | |||||||| ||| Sbjct 1254960 GACAAAGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGA 1254901 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| ||||||||||| || || || || || | || || ||||| Sbjct 1254900 GGAATCCCTTCTTTGTCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCA 1254841 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || ||||| || || || | || || || || || ||||| Sbjct 1254840 ACCTCCAAAGTGATAGTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | ||| || | || | || || |||||||| ||||| |||||| Sbjct 1254564 ATACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 1254505 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 |||| || | || || || | |||||| ||||||||||| | | || ||||| || Sbjct 1254504 GATAATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGT 1254445 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| || |||||||| || ||||||||||| | || || || || Sbjct 1254444 GGAATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCG 1254385 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || ||||| ||||| | || |||||||| || ||||| Sbjct 1254384 ACTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 >seq44 Length=1094211 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || ||||| ||||| || || || | ||| || || | |||||| ||| Sbjct 805538 GTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTCCAATTGTTTACCA 805479 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | |||||||| || || || ||||||||||| |||||||||||||| Sbjct 805478 GCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTGAATCTTTGCTTTG 805419 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||| | ||||| ||||| ||||| || || || ||||| || || || || Sbjct 805418 ACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTC 805359 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || || ||||| Sbjct 805358 TTTACGAAAATTTGCAT 805342 >seq408 Length=31413 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 238542 TATATTTACTCTTTAAAACAGCTCGAGAGAGCCGAAACTCACGATCCCCTATGGAATTCC 238601 ||||||||| | | | |||| || | || | |||||||| || |||||||| Sbjct 25671 TATATTTACACAAAAGAGGAGCTGGAAACTTCCAAGACTCACGACGATCTCTGGAATTCT 25612 Query 238602 GCCCAGATACAAATGGTAAGACTAGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCT 238661 |||||||| || | || | | ||| ||||||||| | || || | ||||| ||||| Sbjct 25611 GCCCAGATCCAGCTTGTCAAAGAAGGGAAAATGCATGGCTTTTTGAGGATGTACTGGGCC 25552 Query 238662 AAAAAGATACTTGAATGGACTAGATCTCCAAAGGAAGCTCTTAGATATAGTATTTATCTG 238721 ||||| || || ||||||||| ||||||| | |||| | |||| ||||||||| Sbjct 25551 AAAAAAATTCTCGAATGGACTGAATCTCCAGAACAAGCATTGGAATATTCTATTTATCTC 25492 Query 238722 AACGATAAATACGAACTCGACGGTACGGATCCTAACGGATACGTAGGT 238769 |||||||| ||| | || || ||||| || |||||||||||| Sbjct 25491 AACGATAAGTACAGTTTGGATGGACAAGATCCAAATGGATACGTAGGT 25444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151181615069060