Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq10 98.7 8e-16 >seq10 Length=2329298 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 |||| ||||||||| ||||||||| ||||||||||| | ||| || | || ||| Sbjct 1253859 ACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCTTCC 1253800 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | |||||||||| | | || || || |||||||| || | || ||| |||||| Sbjct 1253799 AACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCCTGG 1253740 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| ||| | | | | || ||||| | | || ||| | ||| || || ||| Sbjct 1253739 ATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTCTTA 1253680 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| | ||| || || ||||||||||| Sbjct 1253679 CCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 ||||||||||| |||||||||| || ||| || | || |||| ||||| || | | Sbjct 1254297 TCCTTTTGAATATTGTAATCAG-AAAGTGTGCGTCCATCTTCCAATTGCTTTCCAGCAAA 1254239 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | ||| |||||||| || | | |||||| ||| |||||| ||| | | Sbjct 1254238 GATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATTTTAGCCTTAACATT 1254179 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | |||||||||| | || || | |||||| |||||||| || | ||||||||| Sbjct 1254178 TTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTACCAGTCAAAGTTTTCAC 1254119 Query 48715 AAAAATCTGCAT 48726 || |||||||| Sbjct 1254118 GAAGATCTGCAT 1254107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421175755884695