Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq106 116 4e-21 >seq106 Length=643652 Score = 116 bits (128), Expect = 4e-21 Identities = 193/273 (71%), Gaps = 8/273 (3%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| |||||||| | ||||| || ||| |||||| | |||||| Sbjct 406736 ATTGGGATTTTGGCAAAATGGGAATTGGTGGTCTTGATAAAGAATTCAATGCAATTTTCC 406677 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATC-GAAATAATaaaaaaaTTAGGCTGTAAA 164511 | || |||||||| || | | |||| | | ||| || | || || ||||||| ||| Sbjct 406676 GTCGTGCATTTGCATCACG-TGTCTTCCCACCAGAATTAGTTGAACAACTAGGCTGCAAA 406618 Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 || | ||||| ||| || || || || |||||| ||||||||||| ||||||||| Sbjct 406617 CACGTTAAAGGTATTCTACTATTCGGTCCGCCTGGTACTGGTAAAACATTGATGGCTCGA 406558 Query 164572 TGCATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628 || | ||| | ||||| || || ||| ||||| ||||||||||| || | Sbjct 406557 CAAATCG-GCAAAATGTTAAACGCACGTGAACCG--AAAATCGTTAATGGTCCACAAATT 406501 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAAT 164661 | | || || || |||||||||||||||||| Sbjct 406500 CTCGATAAGTACGTTGGTGAGTCAGAAGCTAAT 406468 Score = 113 bits (124), Expect = 5e-20 Identities = 181/259 (70%), Gaps = 12/259 (5%) Strand=Plus/Minus Query 164729 TTATTGTTTTTGATGAGATAGATGCTCTTTGCAA---AAAACGTGGTGAT------AATA 164779 ||||| | || |||||||| |||||| ||||||| || | || || | || | Sbjct 406343 TTATTATATTCGATGAGATCGATGCTATTTGCAAGGCAAGAGGTTCTGTTGCTGGCAACA 406284 Query 164780 TTA---TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCT 164836 | |||| ||| | || ||||| ||| | ||| ||||||| |||||||| || | Sbjct 406283 GTGGAGTTCACGATACTGTAGTTAACCAGCTCCTTGCTAAAATTGATGGTGTTGAGCAGT 406224 Query 164837 TAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTAT 164896 |||| ||||| || || | ||||||||||| | ||| | |||||||| ||| | Sbjct 406223 TAAACAATATCTTGGTTATTGGTATGACCAATAGGAGGGATATGATTGATGAGGCTCTTC 406164 Query 164897 TACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCC 164956 |||||||||| |||| ||| | |||| ||||| || ||||| | ||| ||||| | Sbjct 406163 TACGACCTGGCAGATTGGAAGTACAAATGGAAATTGGTTTACCGAATGAAGCTGGACGAC 406104 Query 164957 TTCAAATTTTAAAAGTTCA 164975 ||||| ||||| |||| Sbjct 406103 AGCAAATCTTAAACATTCA 406085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595762545762000