Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq192 118 6e-22 seq210 111 8e-20 seq204 111 8e-20 seq22 111 8e-20 seq16 111 8e-20 seq10 111 8e-20 seq2 109 3e-19 >seq192 Length=261042 Score = 118 bits (130), Expect = 6e-22 Identities = 85/98 (87%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAA---TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGT 11491 ||||||||| ||||| ||| ||||||||| |||||||||| |||||||||||| Sbjct 44654 AGAATTAATTAAAAAGATTCATCCTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGT 44713 Query 11492 TATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||| |||||||||||||||||||| Sbjct 44714 TATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 44751 >seq210 Length=217737 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 22212 TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 22153 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 22152 CTGAGCTAATGGGCC 22138 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 27945 TTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 27886 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 27885 CTGAGCTAATGGGCC 27871 Score = 109 bits (120), Expect = 3e-19 Identities = 72/79 (91%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 25566 TGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 25507 Query 11516 TGAGCTAATGGGCC-GTCG 11533 |||||||||||||| |||| Sbjct 25506 TGAGCTAATGGGCCAGTCG 25488 >seq204 Length=226175 Score = 111 bits (122), Expect = 8e-20 Identities = 80/92 (87%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 11440 TAATAAAAAATC--AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| |||||| || |||||||||| |||||||||| |||||||||||||||||| Sbjct 97746 TAATCAAAAATTTTAATTTGGCCCATGGGAGGATCGAACTCACGACCTTCGCGTTATTAG 97805 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||| |||| ||||||||||||||| Sbjct 97806 CACGACGCTCTAACCAGCTGAGCTAATGGGCC 97837 >seq22 Length=1532643 Score = 111 bits (122), Expect = 8e-20 Identities = 77/87 (89%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||| || |||| ||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 591101 AAAGAAGGAAATATGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGA 591042 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 591041 CGCTCTAACCAACTGAGCTAATGGGCC 591015 >seq16 Length=1905372 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1438560 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1438501 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 1438500 CTGAGCTAATGGGCC 1438486 >seq10 Length=2329298 Score = 111 bits (122), Expect = 8e-20 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 244653 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 244712 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||||||||| Sbjct 244713 CTGAGCTAATGGGCC 244727 >seq2 Length=3528708 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 414651 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 414710 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 414711 TGAGCTAATGGGCC 414724 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1513147 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1513206 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1513207 TGAGCTAATGGGCC 1513220 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261444368151820