Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq10 131 2e-25 seq44 123 2e-23 seq39 120 3e-22 >seq10 Length=2329298 Score = 131 bits (144), Expect = 2e-25 Identities = 179/248 (72%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| |||| | | || ||||||||||||| || ||| | || | ||||| || || Sbjct 1253212 TTTTACAAAAATCTGCATACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTT 1253153 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 ||| | || |||||| | ||||| || |||||||| ||||||||| ||||||| Sbjct 1253152 TTGGATATTGTAATCGG--AGAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATA 1253095 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 | | || |||||||| ||||| || |||||||| | |||||| || || || | Sbjct 1253094 AGACGCTGTTGATCTGGTGGAATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCA 1253035 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | || |||| | | || || || | ||||| || || ||||||||||||||||| || Sbjct 1253034 ATTGTATCAGAGGGTTCAACTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAA 1252975 Query 95000 ATCTGCAT 95007 || ||||| Sbjct 1252974 ATTTGCAT 1252967 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || || ||||| || | |||||||| | || | ||||||| Sbjct 1253631 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCC 1253572 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| || ||||||| | || |||||||||||||||||| ||||| || || | | Sbjct 1253571 AATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGA 1253512 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || |||||||| || | | |||||||| | || || || | ||||| ||||| Sbjct 1253511 ATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTG 1253452 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||||||||| || |||||||| Sbjct 1253451 CCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | || || |||||||| | ||||||||| || ||| ||| || Sbjct 1252947 ACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCT 1252888 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || ||||||| ||||||||||| ||||||||||| || ||||| || | | Sbjct 1252887 AGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGA 1252828 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | | || |||| | || || || | ||||| ||||| Sbjct 1252827 ATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTG 1252768 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 1252767 CCTGTTAGTGTCTTCACAAAGATCTGCAT 1252739 Score = 125 bits (138), Expect = 6e-24 Identities = 174/242 (72%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||| | | ||| | |||||||| | ||||||||||||||| | Sbjct 1254346 AAAAATTTGCATACCTCCACGAAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAAT 1254287 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || ||||| | ||||| | ||| |||| || ||||| ||||||| | | | Sbjct 1254286 ATTGTAATCAG--AAAGTGTGCGTCCATCTTCCAATTGCTTTCCAGCAAAGATAAGACGT 1254229 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||||||||| ||||| ||||| || || | |||||| ||||| || ||| || Sbjct 1254228 TGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTA 1254169 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | ||||| || | || || ||||| ||||| | ||||||||| ||||||||| Sbjct 1254168 TCGGATGGTTCGACTTCCAATGTTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTGC 1254109 Query 95006 AT 95007 || Sbjct 1254108 AT 1254107 Score = 123 bits (136), Expect = 2e-23 Identities = 153/208 (74%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| ||||| || || ||||| || | |||||||||| || |||| | |||||| | Sbjct 1255226 CAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGTGCGGCCATCCTCGA 1255167 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 | ||||| ||| |||| || || | |||||||||||||||||| ||||| || || | | Sbjct 1255166 GTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGA 1255107 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 |||| |||||||| | | || |||| | || || || | ||||| ||||| | Sbjct 1255106 TTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAAAGTGATCGTTTTAC 1255047 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || |||||||| |||||||| Sbjct 1255046 CCGTCAAGGTCTTCACAAAAATCTGCAT 1255019 Score = 116 bits (128), Expect = 3e-21 Identities = 172/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||||| || || | ||||||||| | || || || || || | Sbjct 1254574 AAAAATCTGCATACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGAT 1254515 Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 || || || | | || ||| |||||||| ||||| || |||| || || | || Sbjct 1254514 ATTGTAGTCAGATAAT-GTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTT 1254456 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||||||||| ||||| ||||||||||| | ||| || ||||| || | | ||||| Sbjct 1254455 GCTGATCTGGTGGAATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGT 1254396 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 ||| | | ||||| || | |||||||| || ||||| | ||| || ||||| || |||| Sbjct 1254395 CAGAGGGCTCGACTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCA 1254336 Query 95007 T 95007 | Sbjct 1254335 T 1254335 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || |||||||| | ||| |||||| || |||| ||| |||| ||| || ||| Sbjct 1253847 GTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCTTCCAACTGCTTACCG 1253788 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| |||| |||||||||||| ||||||||||||||||| | ||||| ||||| Sbjct 1253787 GCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCCTGGATTTTAGCCTTA 1253728 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| || || | | || || || | || || || || || || | ||| Sbjct 1253727 ACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTCTTACCGGTCAAAGTC 1253668 Query 94991 TTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 1253667 TTAACGAAAATCTGCAT 1253651 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | ||| |||||||| || | |||||| ||| || |||| || ||| Sbjct 1254999 ACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCC 1254940 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | || || || ||||||| | | ||| |||||||||||||| ||||||||||| | | Sbjct 1254939 AATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGA 1254880 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | | ||||| | | || || || | ||||| ||||| Sbjct 1254879 ATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTG 1254820 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||| ||||| ||||| ||||| Sbjct 1254819 CCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 105 bits (116), Expect = 6e-18 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || || | ||| |||||||| || | |||||| ||| | || || || ||||| Sbjct 1253403 ACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGG--AGAGAGTACGACCATCCT 1253346 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | |||||||| || |||| || || | || ||||||||||||||||||||||| || | Sbjct 1253345 CAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATCTT 1253286 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| || || || | | || |||| | || || || | || || |||| Sbjct 1253285 GGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGTTT 1253226 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || ||||| ||||| |||||||| Sbjct 1253225 TCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| || | ||| || |||||||| | ||| |||||| || |||| | Sbjct 1254093 CGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCA 1254034 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| | ||||| ||| ||||||| | || ||||||||| || || ||||| || || Sbjct 1254033 TCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTA 1253974 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || || || | | || || | | ||||| || | ||||| Sbjct 1253973 TCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGATA 1253914 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| ||||| | || || |||||||||||||| Sbjct 1253913 GTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 >seq44 Length=1094211 Score = 123 bits (136), Expect = 2e-23 Identities = 158/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||| | || ||||||||||| | || || ||| || |||| || |||| Sbjct 805551 CACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACA--GTGTACGACCATCC 805494 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 |||| ||||| || ||||||| | | ||| |||||||| |||||||||||||| || Sbjct 805493 TCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCT 805434 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||| ||||| ||||| | | ||| |||| | | ||||| |||| |||||||| Sbjct 805433 TGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTC 805374 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTT 95011 || || || || || || || || || |||||| || Sbjct 805373 TTGCCCGTTAGGGTCTTTACGAAAATTTGCATGGTT 805338 >seq39 Length=1160777 Score = 120 bits (132), Expect = 3e-22 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCC 94855 ||||||||||| ||||| ||||| || | ||| |||||| | ||||| || |||| Sbjct 535132 CACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGG--AAAGTGTGCGACCATCC 535075 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || |||||||| ||| | || || | | || |||||||| || || || || ||||| Sbjct 535074 TCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCC 535015 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | || || || ||||| | | |||||| | | | ||||| |||| |||||||| Sbjct 535014 TGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTC 534955 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012 || || || || ||||| || |||||||||||| ||| Sbjct 534954 TTACCGGTTAGGGTTTTTACGAAGATCTGCATGTTTA 534918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448208854510200