Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4128 132 8e-27 seq143 84.2 3e-12 >seq4128 Length=1303 Score = 132 bits (146), Expect = 8e-27 Identities = 190/268 (71%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 ||||||||||| |||| | |||||| || |||||||| |||||||| ||||| ||||| Sbjct 986 GCTAAGCGTCACCGCAAAGTTCTTCGCGACAACATCCAGGGAATCACAAAGCCGGCTATT 927 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||| || ||||| || || ||||| | ||||| | |||| ||||||| Sbjct 926 CGTCGCCTGGCGCGCCGTGGAGGTGTGAAGCGCATTTCTGGCCTAATCTACGAAGAGACG 867 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | || || | | || || | ||| || || ||| || || Sbjct 866 CGCGGCGTGCTCAAGGTGTTTCTGGAAAATGTGATTCGTGACGCCGTCACCTACACGGAA 807 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| ||| | ||||| || || | ||||| |||| || || ||||| | ||||| Sbjct 806 CACGCCAAAAGAAAGACCGTGACAGCTATGGACGTCGTGTACGCCTTGAAGAGACAAGGT 747 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | || || || || |||||| Sbjct 746 CGCACTCTCTACGGCTTCGGCGGTTAAT 719 >seq143 Length=414525 Score = 84.2 bits (92), Expect = 3e-12 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || || | | | | || ||||| ||||| || ||||| ||||||||||| Sbjct 138634 GCCAAGCGCCACCGGAAAGTTTTGCGCGATAATATCCAGGGCATCACGAAGCCAGCTATT 138575 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 ||||| |||| ||||| ||||| ||||| || | |||||| || |||| || || Sbjct 138574 CGTCGCTTGGCCCGTCGCGGTGGCGTCAAACGAATTTCTGGACTGATCTACGAGGA 138519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79061764258635