Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 3e-12 >seq6 Length=2768319 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| ||||| || ||||| ||||| ||| || ||||||| | || || || | || || Sbjct 1228541 TGGAATTCTTTTTAATCATGAATCACCACGACGAGGTGAAAATTTCGTTACAAGGAAAAT 1228600 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACA--GAAGATTCTTTATCTTGGTAAT 194063 ||||| | | |||| || | ||| || | ||| ||| || | || |||||| Sbjct 1228601 TACACGTTCTGTCGCTAAAATTTAC-TTGAATCAACTTGAATATT-TTGAGCTGGGTAAT 1228658 Query 194064 CTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATG 194123 | | |||| |||||||||| || || || || |||||||| |||||| | ||| Sbjct 1228659 TTAGACTCTAAACGGGATTGGGGTCATGCTCGTGACTACGTTGAAGCAATGTGGATGATG 1228718 Query 194124 TTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGA 194167 |||||||| ||| ||| | |||||||| || || || || || Sbjct 1228719 TTGCAACAAGATACACCAAAGGATTATGTTATAGCAACTGGGGA 1228762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807406862204200