Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq13 497 1e-135 seq170 127 3e-24 >seq13 Length=2077869 Score = 497 bits (550), Expect = 1e-135 Identities = 1238/1872 (66%), Gaps = 32/1872 (2%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 || |||||||| || | ||| || || || || ||||||||||| ||||| || || Sbjct 1821396 GTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACCCGTCTTCAGG 1821337 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || || |||| || ||||| || || ||||||| |||| | || ||||| | Sbjct 1821336 CCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGGCTCTGCAACG 1821277 Query 62115 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62174 || ||||| | |||||||||||||| |||||||| || | |||||||||||| | || Sbjct 1821276 TGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGCCATGTGCAT- 1821218 Query 62175 ATCGTCTTTTGT--GGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || |||| | ||||||||||| || ||||| | | ||||| || || | Sbjct 1821217 -TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATATTCTCCGGGA 1821159 Query 62233 GGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCAT 62289 || | | | ||||| ||| || | || || ||||| ||||| || || || | Sbjct 1821158 TCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTCATATCTTCGT 1821099 Query 62290 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTC 62349 ||| | | |||||||| | | ||||| | || || ||| |||||| | Sbjct 1821098 CCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACTATAAATTCAC 1821039 Query 62350 CAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTC 62409 | || | || | ||| |||||| || ||| || || || | |||||||| || | Sbjct 1821038 CCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTGC 1820979 Query 62410 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGAC 62469 | | |||||| | ||| ||||| || ||||| || |||| || || ||| |||| | Sbjct 1820978 CAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAATTCCTAACGC 1820919 Query 62470 CGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACN 62528 | || || | | ||||| || || || |||| | ||| | || | || Sbjct 1820918 CATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTTG 1820860 Query 62529 NNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTAT 62588 || || || || || ||| | |||||| | || || ||||| Sbjct 1820859 TCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGTTTCGTAC 1820800 Query 62589 GGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTT 62645 ||||| ||| || ||||||||| || || || || | || ||||| ||||| ||| Sbjct 1820799 GGTCCAAATTCTTT---AGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTAAATAGTT 1820743 Query 62646 TCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGA 62705 || || |||| || ||| | | ||| || ||| ||| || | || ||| | ||| Sbjct 1820742 TCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACGCATCAGA 1820683 Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 || || | || || | ||||| ||||| || || || || | || || | || || Sbjct 1820682 ATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCATGTTGGAC 1820623 Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62825 | | ||||||||| || ||||| || |||||||| ||||| || || ||||| || Sbjct 1820622 TTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATTCCTCGTC 1820563 Query 62826 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAAC 62882 | | ||| || |||||| ||| | || ||| | | || | || ||| Sbjct 1820562 ACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCGTGACGAAC 1820503 Query 62883 ATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGT 62942 |||||||| |||| ||| |||| |||||| ||||||| || | || ||| || | | Sbjct 1820502 ATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTCT 1820443 Query 62943 ATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTT 63002 | || || ||||| ||||| ||||| || ||||| || | ||| || || ||||||||| Sbjct 1820442 ACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTTT 1820383 Query 63003 TTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATA 63062 |||| || || ||||| || | || | ||||| || || || | ||||||||| || Sbjct 1820382 CTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGATTCAATT 1820323 Query 63063 ATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTAT 63122 || || ||| | | ||||| | | ||| | || || | |||||| Sbjct 1820322 ATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTTCTCGTAT 1820263 Query 63123 AGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCC 63182 ||| || | |||||| | || ||||| || | | ||||||||| || Sbjct 1820262 TTTGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGACATTTATTT 1820203 Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242 ||||||||||| ||||| ||| | || ||| || | |||||||||||||| |||||| Sbjct 1820202 GGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGATCCGGAATC 1820143 Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302 || || || ||||| || | | | || || || || || ||||| || || Sbjct 1820142 CAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTCTTCTTCAGG 1820083 Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362 | || ||| | | | ||| | |||||| || |||||||| || || | | || || Sbjct 1820082 TTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAGGCCCCGGGA 1820023 Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422 ||||| ||||||||||| || | || | || ||| ||| | || |||||||| ||| Sbjct 1820022 CGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTCAACATGGGA 1819963 Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC--TTCCACTGGCACGAATAT 63480 | | ||| || ||||| ||||| || || || |||||| |||| | || || ||| Sbjct 1819962 ACGAGACCATTAGATATGCCATTTGTGCC--AGCTATAGCAGTTCCCTTCGCTCGGATAC 1819905 Query 63481 TACTAATTGA----TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTT 63536 ||| || || || ||||| ||||| | || ||||| | ||||| || | Sbjct 1819904 ----AATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCAGCGCTCC 1819849 Query 63537 AACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC 63596 | | | |||| ||||| || ||| |||| |||| | | ||||||||| || Sbjct 1819848 ACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACACGAGGAG 1819789 Query 63597 ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTT 63656 | ||| |||||| || | || || || || || || || || || || ||||| Sbjct 1819788 AGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAAATATTTT 1819729 Query 63657 TCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTAC 63715 || ||||| || |||||||| || || || | || ||||| || | |||||||| || Sbjct 1819728 TCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAATTCCGAC 1819670 Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775 || || | ||| |||||||||||||||| ||| |||| || || ||||| || | Sbjct 1819669 TGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTTTTAAAAG 1819610 Query 63776 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63835 ||||| |||| | ||||||||| || || |||||||| ||||| || |||||||| Sbjct 1819609 ATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGTCGTAAAT 1819550 Query 63836 AATAACCGAGTT 63847 ||| | ||||| Sbjct 1819549 AATTGCTGAGTT 1819538 >seq170 Length=322284 Score = 127 bits (140), Expect = 3e-24 Identities = 186/261 (71%), Gaps = 3/261 (1%) Strand=Plus/Minus Query 33288 ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTC 33347 |||||| ||||| ||||| || |||||||| || | || ||||| | || ||||| Sbjct 24255 ATGTTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTC 24196 Query 33348 GTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33407 ||||||||| || || || ||||| | ||| | ||| || ||||| || || || || || Sbjct 24195 GTTGGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAA 24136 Query 33408 TGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACC 33467 ||| ||||||||||| || ||||||||||| ||||| | ||| || || || Sbjct 24135 ACTGCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATT 24076 Query 33468 GGC--GCTGTCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 33524 || || | || |||||| ||||| || ||||||||||| ||||| || | Sbjct 24075 AGCTGACTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAA 24016 Query 33525 CGTTTCTATGGCATTAAAGAG 33545 ||||| || || || ||||| Sbjct 24015 GGTTTCAATTGCGTTGAAGAG 23995 Score = 125 bits (138), Expect = 9e-24 Identities = 191/272 (70%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 ||| |||| |||||| ||||| |||| ||| ||||||||||| || | ||||| ||||| Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683 || || || ||||||||| | | ||| || | || || || || | || || || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743 | | | ||||||||| || |||||||| ||| || || || || | || ||| || Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 33744 AAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTAC 33803 || | || || | | || |||||| | ||||| | | || || || | | ||| Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 33804 TTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 ||| |||||||||||||| || || || |||| Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGCCT 23648 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 |||||| |||||||||||||| || ||||| ||| ||||| || || || || || || Sbjct 24601 CATAACACCCATTTTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATC 24542 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGT 33095 | ||| || |||||||||||||||| ||||| || Sbjct 24541 AAGTGAGATTATTTCCATGAAATCAAAAGGATTTGT 24506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622832772386200