Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq408 122 8e-23 seq10 95.1 1e-14 >seq408 Length=31413 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || || || || || |||||| |||| ||| ||||| ||| || || ||||| || Sbjct 25635 ACTCACGACGATCTCTGGAATTCTGCCCAGATCCAGCTTGTCAAAGAAGGGAAAATGCAT 25576 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | | | ||||||||||||||||| |||||||| |||||| || |||| || || Sbjct 25575 GGCTTTTTGAGGATGTACTGGGCCAAAAAAATTCTCGAATGGACTGAATCTCCAGAACAA 25516 Query 71792 GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAAC 71851 || | || |||||||||||||| ||||||| |||||| | || || | ||||| || Sbjct 25515 GCATTGGAATATTCTATTTATCTCAACGATAAGTACAGTTTGGATGGACAAGATCCAAAT 25456 Query 71852 GGTTATGTCGGT 71863 || || || ||| Sbjct 25455 GGATACGTAGGT 25444 >seq10 Length=2329298 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 26761 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAG 26820 || |||||||||| | ||||| || ||| |||| || ||| | |||||| | ||| | | Sbjct 1252731 CACACAAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTG 1252790 Query 26821 AATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTC 26880 | | || ||||| || | || || |||||| || ||||| || || |||| Sbjct 1252791 AGCCTTCTGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTC 1252850 Query 26881 CCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCG 26940 | || || |||||| | || | | |||||||| || ||||||| | | | | | Sbjct 1252851 CAGACCAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTG 1252910 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | |||||||||||||| || || || | ||| ||||||| | ||| | ||||| Sbjct 1252911 ATTATAACATTCAAAAGGAGTCGACCCTACATTTGGTCCTTCGTCTTCGTGGAGG 1252965 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || ||||| || ||| | ||||| | || | ||| | Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || ||| | || || |||||| |||||||||||||| ||||| |||||| Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAA 1254910 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | || || | | || || ||| | ||||| | | | | | |||||||||| Sbjct 1254911 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAAC 1254970 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || || || ||||| ||| ||||| |||| || Sbjct 1254971 ATCCAGAAGGAATCCACTCTCCATTTGGTACT 1255002 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || || || || ||| ||||||| | ||| | ||| | Sbjct 1255018 AATGCAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTC 1255077 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || ||||| || | ||||| || || || || ||||| || ||||| ||||| Sbjct 1255078 TGATACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1255137 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | | |||| | ||| ||||||||||| |||| | | | ||| ||||| Sbjct 1255138 GCAACGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAA 1255197 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||| || || || || || | ||||| ||||| |||||| |||| ||||| Sbjct 1255198 CATCCAGAAGGAGTCAACCTTGCATCTTGTCCTTAGACTTCGAGGTGGAAA 1255248 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || || ||||| ||| |||| || | ||| | ||| | Sbjct 1254563 ATGCAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCT 1254622 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || |||||| || || ||||| || || || || || Sbjct 1254623 GACACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAG 1254682 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | |||| | ||||| ||| | ||||| | | | | |||||||||| Sbjct 1254683 CAGAGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAAC 1254742 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || || || ||| |||| |||| ||||||||| | ||||| Sbjct 1254743 ATTCAGAAGGAGTCCACTCTCCACTTGGTACTGAGACTTCGTGGAGG 1254789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478574475700400