Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq13 206 7e-48 >seq13 Length=2077869 Score = 206 bits (228), Expect = 7e-48 Identities = 687/1064 (65%), Gaps = 21/1064 (2%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 ||||||||| | || | ||||| || ||||| ||||| ||| | ||| | | || || Sbjct 1819619 ATCAATGGTAAAATCGCCGAACGACCTCAGCACATGTTGATGAGAGTTTCAGTCGGAATT 1819678 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 || | ||| | |||||||| || ||||| || || || || | ||| Sbjct 1819679 CACGGTGAAGATATCGATGCCGCAATCGAAACGTACAACCTCCTTTCGGAAAAATATTTC 1819738 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 || || || | |||||| ||| | |||| || ||| |||||| | || || || Sbjct 1819739 ACTCATGCATCCCCAACATTGTTCGCAGCTGCGACACGTCGTCCACAACTCTCCTCGTGT 1819798 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 ||||| | | ||| || ||||| || ||||| ||||| | | | || || Sbjct 1819799 TTTCTATTGACCATGGTCGAGGATTCAATTGAGGGAATCTTCAAGTCTGTGGAGCGCTGC 1819858 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAG 363729 ||| | || || ||||| ||||| ||||| || || |||| | | || || || Sbjct 1819859 GCTATGATCTCGAAGAACGCAGGAGGAATCGGCTTAAACGTCCATTGTATCCGAGCGAAG 1819918 Query 363730 --AACAGTTACATTCGC-GGCACAGGGGG-ATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 ||| | || | || |||||| || ||| || ||||| || ||||||||| | | Sbjct 1819919 GGAACTGCTATA---GCTGGCACAAATGGCATA-TCTAATGGTCTCGTTCCCATGTTGAG 1819974 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 |||||| |||| ||| | ||| || |||||||| ||| || || ||||| || Sbjct 1819975 GGTGTTTAACAACGTTGCAAAGTATGTTGACCAGGGAGGAAATAAACGTCCCGGGGCCTT 1820034 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 ||||| || | ||||| ||||| ||| | ||||||||||| | || ||| || Sbjct 1820035 CGCTATTTACTTGGAGCCCTGGCATGCAGATGTCTTTGAGTTTCTGAACCTGAAGAAGAA 1820094 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 ||| || ||| || ||||| || || | || || ||||| ||| || | || | Sbjct 1820095 CACTGGCGCAGAAGAGCACCGTGCTCGCGACTTATTTTACGCACTCTGGATTCCGGATCT 1820154 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 ||||||||| | || ||||||| | | | ||||| | | || ||| | ||||||| Sbjct 1820155 CTTTATGAAGAGGGTCGAGGCAGATGAAGACTGGTCTTTGATGTGTCCAAATAAATGTCC 1820214 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 | || | || || |||||||| | | | | |||||| ||| || || || Sbjct 1820215 TGACCTCTTTGAGGTGTGGGGTGATAAATTCGAAGAGCTATACACAAAATACGAGAACGA 1820274 Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 ||| || | || | || | |||| |||||||| || || || || || Sbjct 1820275 GGGGCGTGCCAACAGGAAGGTGAAGGCCAGGCAGCTGTGGTTTGCTATAATTGAATCTCA 1820334 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 | | ||||||||||| || |||||||| ||||| || | |||||| | ||| ||||| Sbjct 1820335 GGTAGAGACAGGAACTCCTTATATGTTATACAAGGACGCATGCAACAGAAAGAGTAACCA 1820394 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 |||| | | || || ||| | ||||| ||||| || || ||| | || ||| | || Sbjct 1820395 GCAGAATATCGGGACTATTAAATGTAGCAATCTATGCACAGAAATTGTAGAGTACTCGGC 1820454 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------ 364319 ||||||| | ||||||||||| | || || || ||| | ||| || Sbjct 1820455 CGCCGACGAAATAGCCGTATGTAATTTGGCCTCTATTGCGTTGAACATGTTCGTCACGCC 1820514 Query 364320 --AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGC 364377 |||||| | | |||| |||| | | | | || || | | || | Sbjct 1820515 GGAAAAGAAG-----TATGACTTCCAGAAATTGAAGGCAGTTACTAAAACAGTGACGAGG 1820569 Query 364378 AATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAAT 364437 ||||| ||||| ||||||| | || || ||||| || || ||||| || || || Sbjct 1820570 AATCTAAACAAGATTATCGATATTAACTACTATCCGATGCCAGAAGCTAAGAAGTCCAAC 1820629 Query 364438 ATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGA 364481 ||| || ||||||||||| | ||||| || ||| | ||||| Sbjct 1820630 ATGAAGCACCGCCCGATTGGCATAGGTGTGCAAGGCATGGCTGA 1820673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303108204991490