Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq10 98.7 8e-16 >seq10 Length=2329298 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| |||||||| || ||| | || || ||||| ||||| | ||| || | Sbjct 1254563 ATGCAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCT 1254622 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | || || || ||| ||||| |||||| ||||| || ||| Sbjct 1254623 GACACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAG 1254682 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||| | |||| ||| ||||| ||||| ||||| | || | |||| |||||| Sbjct 1254683 CAGAGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAAC 1254742 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||| || ||||| ||| | || |||| ||||| | || ||||| Sbjct 1254743 ATTCAGAAGGAGTCCACTCTCCACTTGGTACTGAGACTTCGTGGAGG 1254789 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||| || ||||| || || || || || ||||| || ||| | ||| ||| | Sbjct 1252736 AAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCCT 1252795 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || ||| | | || || || ||| |||||||| || | || || Sbjct 1252796 TCTGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGAC 1252855 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||||||| | || | ||| |||||||| ||||||||| || || | |||||| Sbjct 1252856 CAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTAT 1252915 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGT 115494 ||||||||||| ||||| || ||||| |||| Sbjct 1252916 AACATTCAAAAGGAGTCGACCCTACATTTGGT 1252947 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||| || ||||| || || || || || || ||| | ||| || || Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || ||| |||||| || ||||| ||| | || ||||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAA 1253086 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||| | ||| || ||||| || || |||| || | ||||||| || Sbjct 1253087 CAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAAT 1253146 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || |||||||||||||| | ||| | ||| |||||||| ||||||| Sbjct 1253147 ATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGG 1253193 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| || || | || || || ||||| ||| | ||| ||| || Sbjct 1254335 ATGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCT 1254394 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | ||||| || ||| || ||||||||| | || |||||| Sbjct 1254395 GACACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAG 1254454 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| ||| || |||||||| || |||| || | | || || || Sbjct 1254455 CAACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAAT 1254514 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || |||||||| || | || ||||| | | |||||||||| Sbjct 1254515 ATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGG 1254561 Score = 82.4 bits (90), Expect = 6e-11 Identities = 171/255 (67%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| || || | ||||| ||||| || || | ||| || | Sbjct 1255018 AATGCAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTC 1255077 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || || ||| | | || || ||||| ||||| ||||| | || ||||| Sbjct 1255078 TGATACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1255137 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | | |||| ||| || |||||| | || |||| | || || |||||||||| Sbjct 1255138 GCAACGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAA 1255197 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAAACCACAATA 115524 ||| || || ||||| || | ||| | || | ||| | ||||| |||| | || Sbjct 1255198 CATCCAGAAGGAGTCAACCTTGCATCTTGTCCTTAGACTTCGAGGTGGAA------ATTA 1255251 Query 115525 AAAAATTAATATTAT 115539 ||||||||||| ||| Sbjct 1255252 AAAAATTAATAATAT 1255266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425267822883400