Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10 140 3e-28 seq408 86.0 5e-12 >seq10 Length=2329298 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||||||||||||||| | || ||| | || || || | || Sbjct 1253650 AATGCAGATTTTCGTTAAGACTTTGACCGGTAAGACAATTACATTGGAGGTTGAACCATC 1253709 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || |||||| | ||| |||||| ||||||||||| |||||||| || || Sbjct 1253710 AGATACGATCGAGAATGTTAAGGCTAAAATCCAGGACAAAGAAGGTATTCCACCAGATCA 1253769 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || |||||||| || || || ||||||| ||||||| || ||||||||| Sbjct 1253770 GCAACGATTGATCTTTGCCGGTAAGCAGTTGGAAGATGGTCGCACTTTGTCCGATTACAA 1253829 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||| || || || || ||| |||| || | ||| | || |||| Sbjct 1253830 CATCCAAAAGGAGTCAACACTTCATCTAGTTCTGCGTCTACGTGGTGGAA 1253879 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||||||||| || || || ||||||| | ||||| ||| | ||| Sbjct 1254335 ATGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCT 1254394 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | || | ||| ||||||||||| |||||||| || || Sbjct 1254395 GACACTATTGAAAATGTAAAGGCTAAGATTCAA-GACAAAGAAGGCATTCCACCAGATCA 1254453 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | |||||||| || |||||||| || |||| ||||| | || ||||| Sbjct 1254454 GCAACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAA 1254513 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || ||||| || || || || || ||||| | || ||||||| Sbjct 1254514 TATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGG 1254561 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || ||| | || || || | ||||| | ||||| || | ||| Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || ||| |||| || |||| ||| |||||||| || |||||||| || || Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAA-GACAAAGAGGGCATTCCACCAGATCA 1253085 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| |||| ||||| || ||||| || || |||| ||| || | ||||||||| Sbjct 1253086 ACAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAA 1253145 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| |||||||| || || || ||| | ||||| || | |||||||| Sbjct 1253146 TATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGG 1253193 Score = 134 bits (148), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||||| ||||| ||| | ||||| | || || || |||| Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| | || | ||| ||||||||||||||||| || || || Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGATTCAG-GACAAAGAAGGGATTCCTCCAGATCA 1254909 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| ||||| || || ||||| ||||| | ||||||| || ||| || || Sbjct 1254910 ACAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAA 1254969 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||||| || || Sbjct 1254970 CATCCAGAAGGAATCCACTCTCCATTTGGTACT 1255002 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || |||||||| || |||| || ||| | || ||| | ||||| ||| | ||| Sbjct 1253195 ATGCAGATTTTTGTAAAAACACTGACTGGGAAAACAATTACATTAGAAGTTGAGCCTTCT 1253254 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || |||| |||||| || |||||||| ||||| || || ||| Sbjct 1253255 GATACAATTGAAAATGTGAAAGCCAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 1253314 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | |||||||| || ||||| | || |||| ||| ||| | ||| || || Sbjct 1253315 CAGCGTTTGATTTTTGCTGGTAAACAGCTTGAGGATGGTCGTACTCTCTCCGACTATAAC 1253374 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || |||||||| ||||||||||| ||| | || | ||||| Sbjct 1253375 ATTCAGAAGGAATCCACTCTACATTTAGTTCTACGTCTTCGCGGAGG 1253421 Score = 123 bits (136), Expect = 2e-23 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||||||||| ||||| || ||| | ||||| | ||||| ||| | || Sbjct 1253878 AATGCAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATC 1253937 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || ||| | || |||| || | || || || || || || ||||| || Sbjct 1253938 CGATACCATTGAG--AATGTTAAAGCTAAGATCCAA-GATAAGGAGGGTATCCCACCGGA 1253994 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || || || | || |||||||| ||||||||||| |||| ||||||| || |||||| Sbjct 1253995 TCAGCAACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTA 1254054 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||| || ||||| || || || || ||| | || || | ||| | || |||| Sbjct 1254055 CAACATCCAAAAGGAGTCAACTCTCCATCTGGTTCTGCGTCTACGTGGTGGAA 1254107 Score = 120 bits (132), Expect = 3e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| ||||| ||||| |||||| | ||||| | ||||| || | || Sbjct 1255018 AATGCAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTC 1255077 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||| || || || | ||| |||||| || || ||||| ||||| || || || Sbjct 1255078 TGATACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1255137 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | ||||||||||| |||||| | || |||| |||||| || |||||| || Sbjct 1255138 GCAACGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAA 1255197 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 || || || || || || | ||| | || || || || |||| |||||||| Sbjct 1255198 CATCCAGAAGGAGTCAACCTTGCATCTTGTCCTTAGACTTCGAGGTGGAAATTA 1255251 Score = 113 bits (124), Expect = 4e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || |||||||| |||||| | || ||| | ||||| || | || Sbjct 1254106 AATGCAGATCTTCGTGAAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATC 1254165 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || ||||| | ||| | |||| ||| || || ||||| ||||| || || | Sbjct 1254166 CGATACCATCGAAAATGTTAAGGCTAAAATTCAG-GATAAGGAAGGAATTCCCCCAGATC 1254224 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || |||| ||||| || || ||||| ||||||| ||||| | ||||||| Sbjct 1254225 AGCAACGTCTTATCTTTGCTGGAAAGCAATTGGAAGATGGACGCACACTTTCTGATTACA 1254284 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||||| ||||| || || || || || || Sbjct 1254285 ATATTCAAAAGGAATCTACTCTCCACTTGGTCCT 1254318 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || ||| | || || | ||||| || | ||| Sbjct 1254563 ATGCAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCT 1254622 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || |||| || || | ||| || || ||||| || || || ||||| Sbjct 1254623 GACACTATTGAAAATGTGAAGGCTAAGATTCA-GGATAAGGAAGGCATCCCCCCAGACCA 1254681 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | |||||||| ||||| ||||| ||||| | ||||| | ||| || || Sbjct 1254682 GCAGAGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAA 1254741 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || || || || || || | ||||| Sbjct 1254742 CATTCAGAAGGAGTCCACTCTCCACTTGGTACTGAGACTTCGTGGAGG 1254789 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | || || ||| | |||||| | ||||| || | ||| Sbjct 1253423 ATGCAGATTTTCGTGAAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCT 1253482 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || |||| ||||| | ||| || || ||||| ||||| || || || Sbjct 1253483 GACACTATTGAAAATGTGAAGGCAAAGATTCA-AGATAAGGAAGGAATTCCTCCAGATCA 1253541 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || ||||| || |||||||| || |||| || || | ||||| || Sbjct 1253542 GCAACGACTCATCTTTGCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAA 1253601 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||| || || ||||| || || || || ||| | || | || |||| Sbjct 1253602 TATTCAGAAGGAGTCCACCCTCCACTTGGTACTACGTCTCCGGGGTGGAA 1253651 >seq408 Length=31413 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 51103 TTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCC 51162 || ||||| | ||||||| ||||| | |||||| ||| | || | ||| ||||||| Sbjct 25457 TTTGGATCTTGTCCATCCAAACTGTACTTATCGTTGAGATAAATAGAATATTCCAATGCT 25516 Query 51163 ATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCG 51222 |||| | |||||||| | |||||| |||||||||||||| | || | || Sbjct 25517 TGTTCTGGAGATTCAGTCCATTCGAGAATTTTTTTGGCCCAGTACATCCTCAAAAAGCCA 25576 Query 51223 TGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGTT 51282 ||||| || || || |||||| || || || ||||| | ||||||||||| Sbjct 25577 TGCATTTTCCCTTCTTTGACAAGCTGGATCTGGGCAGAATTCCAGAGATCGTCGTGAGTC 25636 Query 51283 TGGCAACTTGCCAGCTC 51299 | | || || ||||||| Sbjct 25637 TTGGAAGTTTCCAGCTC 25653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433250392986425