Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq10 174 3e-38 seq44 149 1e-30 >seq10 Length=2329298 Score = 174 bits (192), Expect = 3e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | ||||| ||||| || ||||| ||||| ||||||||||| || Sbjct 1252965 CCTCCACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGAC 1252906 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||||| ||| || || || || || | |||||| ||||| || ||| Sbjct 1252905 AGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGA 1252846 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || || |||||||| ||||| ||| || ||||| || | | || ||| Sbjct 1252845 ATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACT 1252786 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||||||||| ||||| || || || ||||| || || ||||||||| || Sbjct 1252785 TCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTTG 1252735 Score = 170 bits (188), Expect = 4e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | ||||||||| || |||||||| || || || |||||||| | Sbjct 1253651 TTCCACCCCGGAGACGTAGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAG 1253592 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | ||||| || || || ||||| || || ||||||| ||| || || || | Sbjct 1253591 ATAAGGTACGGCCATCCTCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAG 1253532 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| |||||||| ||||||||||||||||| || || || ||||| | | ||| | Sbjct 1253531 GAATTCCTTCCTTATCTTGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAA 1253472 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||| ||||| ||||| || || || || || ||||| |||||||| Sbjct 1253471 CTTCCAATGTGATCGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| | || ||||||||| || |||||||| || || |||||||| ||||| Sbjct 1254789 CCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAA 1254730 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || ||||| || ||||| || || || || | ||| || ||||| || || Sbjct 1254729 AGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGG 1254670 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || |||||||| ||||| || || || ||||| | | ||| ||| Sbjct 1254669 ATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACT 1254610 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || ||||| || || | ||||| || || |||||||| Sbjct 1254609 TCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || ||||| | |||||| || || ||||| || || ||||||||||| |||| Sbjct 1255019 TTCCACCACGGAGGCGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGG 1254960 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | || ||||| || ||||| || || || || || | |||||| || || | Sbjct 1254959 ACAAAGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAG 1254900 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| ||||| |||||||| ||||| ||| ||| || ||||||| | ||| | Sbjct 1254899 GAATCCCTTCTTTGTCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAA 1254840 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 1254839 CCTCCAAAGTGATAGTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || |||| || | || || || ||||| ||||||||||| ||||||| Sbjct 1253879 TTCCACCACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGG 1253820 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | |||||||| |||||||| ||||| || || | || ||| || || |||| Sbjct 1253819 ACAAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTG 1253760 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| ||||| || || || ||||| || |||||| || |||| || ||| | Sbjct 1253759 GAATACCTTCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAA 1253700 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | ||||| || || || || || || | ||||| ||||| ||||||||| Sbjct 1253699 CCTCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCATT 1253650 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || |||| |||| || || || ||||| ||||||||||| ||||||| Sbjct 1254107 TTCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGG 1254048 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | | || | ||||| ||||| || || ||||| || ||||||| ||| || || |||| Sbjct 1254047 ACAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTG 1253988 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || ||||| ||||| ||||| || || || ||| ||||| || | || || | Sbjct 1253987 GGATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGA 1253928 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||| ||||| ||||| || || | ||||| || || ||||||||| Sbjct 1253927 CTTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || ||||| | |||||||| || || |||||||| ||||| || || || || Sbjct 1254561 CCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAT 1254502 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | |||||| || || || || || || || || | | ||| || || |||||| Sbjct 1254501 AATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGA 1254442 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| |||||||||||||| ||||| || || || ||||| | | || ||| Sbjct 1254441 ATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACT 1254382 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || || || | ||||| || || || ||||| Sbjct 1254381 TCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 150 bits (166), Expect = 3e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || || |||||||||||||| || |||||||||||||| | ||||| || | Sbjct 1253174 CAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACCATCCTCCA 1253115 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||| || || || || || || | ||||| || ||||||||||| || |||||||||| Sbjct 1253114 ACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTTGTCTTGAA 1253055 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || || || || ||| || || || | | ||| |||||||||||||| || || | Sbjct 1253054 TTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGATCGTCTTGC 1252995 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || || ||||| || ||||| Sbjct 1252994 CAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285 ||||||||||| || ||||| | | || | || | || ||||| || ||||||||| Sbjct 1255254 TTTTAATTTCCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTA 1255195 Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 |||||||| || || | ||||| || | || || ||||| || || | | ||| || Sbjct 1255194 TAATCGGACAGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGA 1255135 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || ||||| |||||||| || || || || |||||||| || ||||| || | Sbjct 1255134 TCTGGAGGAATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAA 1255075 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | ||| |||||||| ||||| ||||| ||||| | |||||| || || ||||||||| Sbjct 1255074 GGTTCAACTTCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATT 1255018 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| || | || || ||||| ||||| || || || |||||||| |||||| Sbjct 1253421 CCTCCGCGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAG 1253362 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || || || || || | | ||||| || || ||| Sbjct 1253361 AGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGA 1253302 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || ||||| || || || || || || || || || | | || ||| Sbjct 1253301 ATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACT 1253242 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || ||||| || || || || || || || |||||||| Sbjct 1253241 TCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 >seq44 Length=1094211 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || || || |||||||| || || ||||| Sbjct 805568 CCACCACGGAGGCGAAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGAC 805509 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || || || || || || || || || | |||||| || || ||| Sbjct 805508 AGTGTACGACCATCCTCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGA 805449 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || |||||||||||||| ||||| || || || || | | ||| || Sbjct 805448 ATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACC 805389 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || ||||| |||||||| ||||| || ||||| Sbjct 805388 TCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921453109485400