Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq10 105 5e-18 >seq10 Length=2329298 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||||||||| || ||| | || ||| |||| |||||||| || ||| ||||| || | Sbjct 1252735 CAAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCC 1252794 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAA 21949 | || || | | | ||||| || ||| ||||||||||| | ||| | | Sbjct 1252795 TTCTGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGA 1252854 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 ||| || ||| | ||||||||||||||||| ||||||||| || || | ||||| Sbjct 1252855 CCAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTA 1252914 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || ||||| ||||| || || || ||| |||| | ||| | || ||||| Sbjct 1252915 TAACATTCAAAAGGAGTCGACCCTACATTTGGTCCTTCGTCTTCGTGGAGG 1252965 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || || | ||||| || || || ||||| || || ||||| ||| | | Sbjct 1254106 AATGCAGATCTTCGTGAAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATC 1254165 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| |||||| ||||| || || | || | | || Sbjct 1254166 CGATACCATCGAAAATGTTAAGGCTAAAATTCAGGATAAGGAAGGAATTCCCCCAGATCA 1254225 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 || | |||||||||||||| || ||| | |||||| | || | | |||||||| Sbjct 1254226 GCAACGTCTTATCTTTGCTGGAAAGCAATTGGAAGATGGACGCACACTTTCTGATTACAA 1254285 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 |||||| |||||||||||||| || |||| | || | || ||||| Sbjct 1254286 TATTCAAAAGGAATCTACTCTCCACTTGGTCCTCCGACTTCGTGGAGG 1254333 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || || ||||| |||||||| || || |||| ||| | || Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | ||||| || ||| || ||||| || | ||| | | ||| Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAA 1254910 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | |||||||||||||| || ||| | ||||| ||| || |||| || || Sbjct 1254911 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAAC 1254970 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||||||||| ||||| ||| ||||| | || | || || ||| Sbjct 1254971 ATCCAGAAGGAATCCACTCTCCATTTGGTACTTCGCCTCCGTGGTGGA 1255018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358060661527030