Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq10 136 3e-27 seq44 127 2e-24 seq39 113 4e-20 >seq10 Length=2329298 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||||||||||| || ||||| || |||||||| || ||| Sbjct 1253424 ATACCTCCGCGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCG 1253365 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| ||| ||||| ||||||||||| | || | ||||||||| || ||| Sbjct 1253364 GAGAGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGA 1253305 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| |||||||| || || || ||| | | ||||| || || | | || Sbjct 1253304 GGAATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCA 1253245 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || ||||| |||||||||||||||||||| Sbjct 1253244 ACTTCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||||| || | ||| | ||||| |||||||| || ||||||||| Sbjct 1253196 ATACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCG 1253137 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| || | ||||| ||||| |||| ||||||||||| || || Sbjct 1253136 GAGAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGT 1253077 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| |||||||| ||| || ||| | | |||| || || | || ||| Sbjct 1253076 GGAATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCA 1253017 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||| ||||| || |||||||| || ||||| ||||| Sbjct 1253016 ACTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | || ||| | ||| | || || || ||||| |||||||||||| Sbjct 1254108 ATTCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCG 1254049 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| ||| || | ||||||||| || ||||||| || || || ||||| Sbjct 1254048 GACAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGT 1253989 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || ||||| ||| | | |||| ||| |||| | ||| Sbjct 1253988 GGGATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCG 1253929 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | |||||||| |||| || |||||||| |||||||| Sbjct 1253928 ACTTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || ||||| | || ||||| || || ||||| || ||| Sbjct 1255020 ATTCCACCACGGAGGCGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCG 1254961 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| ||||| | ||| |||||||| |||| ||||| ||||| || ||| Sbjct 1254960 GACAAAGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGA 1254901 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| |||||| || | | |||| ||||| | | ||| Sbjct 1254900 GGAATCCCTTCTTTGTCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCA 1254841 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||||||||| | ||| || || || || ||||| Sbjct 1254840 ACCTCCAAAGTGATAGTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || ||||||| || || || ||||||||||| ||||| Sbjct 1252968 ATCCCTCCACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCA 1252909 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| |||||| || ||||| ||||| |||| | | || ||||| ||| Sbjct 1252908 GACAGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGA 1252849 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || ||||| || |||||| || | | ||||| ||| || | | || Sbjct 1252848 GGAATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCA 1252789 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | |||||||| || || || || ||||| |||||||| Sbjct 1252788 ACTTCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCAT 1252739 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||| || ||||| | ||||| ||| || | |||||| ||| Sbjct 1253619 GTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCCAATTGTTTCCCA 1253560 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| || || || || |||||||| ||||| || || ||||||| || Sbjct 1253559 GCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTC 1253500 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||||| ||||| | | ||| || |||| || | ||||||||| || |||||| Sbjct 1253499 ACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTGCCAGTAAGAGTT 1253440 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 1253439 TTCACGAAAATCTGCAT 1253423 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | || ||||| ||| | || || || ||||| |||||||||||| Sbjct 1253880 ATTCCACCACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCG 1253821 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| |||||| | || ||||| || |||| | || || || || || Sbjct 1253820 GACAAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGT 1253761 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| ||||||||||| || ||| | ||| | | || | || || | | ||| Sbjct 1253760 GGAATACCTTCTTTGTCCTGGAT-TTTAGCCTTAACATTCTCGATCGTATCTGATGGTTC 1253702 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||||| ||| || || ||||||||||| Sbjct 1253701 AACCTCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| || || || | | || || || | || || ||||| || || ||||| || Sbjct 1254564 ATACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 1254505 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | || || || ||| || | |||||||||||| | || | ||| || || || || Sbjct 1254504 GATAAT-GTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGG 1254446 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||||||||||||||||| |||||| |||| | ||||| ||||| | || || Sbjct 1254445 TGGAATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTC 1254386 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| |||| ||| | || || || || | ||| ||||||||||| ||||| Sbjct 1254385 GACTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| ||||||| || || || | || || || || |||||||| || ||| Sbjct 1254792 ATACCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCG 1254733 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||| | ||| || ||||| | || | | ||| ||||| || Sbjct 1254732 GAAAGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGG 1254673 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| || || |||||| || | | ||||| ||||| | | ||| Sbjct 1254672 GGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCA 1254613 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||||||| |||| || || |||||||||||||| Sbjct 1254612 ACTTCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || ||||| | || | ||| | || || || || || ||||| |||||| | Sbjct 1255245 CCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGAC 1255186 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||| || ||||||||||| || | || | ||| || || || |||||| Sbjct 1255185 AGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGA 1255126 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| || || || || || | | ||||| ||| || | | ||| || Sbjct 1255125 ATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACT 1255066 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | |||||| || |||| || || |||||||||||||| Sbjct 1255065 TCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCAT 1255019 >seq44 Length=1094211 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || || || | || ||||| ||||| || ||||| ||| Sbjct 805569 ACCACCACGGAGGCGAAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGA 805510 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| ||| || | |||||||||||| |||| ||||| ||||| || || || Sbjct 805509 CAGTGTACGACCATCCTCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGG 805450 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| |||||||| || ||||||| ||| | | ||||| || || | || |||||| Sbjct 805449 AATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGAC 805390 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 114384 || | || | || ||||| || || || ||||| ||||| ||||||| Sbjct 805389 CTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTTACGAAAATTTGCATGG 805340 >seq39 Length=1160777 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 |||||| || || || | | || || || | ||||| || || || ||||||||||| Sbjct 535153 AATACCACCTCGGAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATC 535094 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | || ||| ||| ||||| |||||||| ||| | || ||||||||||| || || Sbjct 535093 GGAAAGTGTGCGACCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGG 535034 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 || || || || ||||| ||||| ||| | | ||||| ||||| | || || Sbjct 535033 GGGGATTCCCTCCTTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTC 534974 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 ||| || | || | || || ||||| || |||||||| || ||||||||| Sbjct 534973 GACCTCAAGAGTGATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCATG 534922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420059155898340