Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq3563 138 1e-27 seq3509 136 3e-27 seq650 93.3 4e-14 >seq3563 Length=1406 Score = 138 bits (152), Expect = 1e-27 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGC 20257 || |||||||| || || || | ||| || || || | | || || || ||||||| | Sbjct 298 TGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACGTGAGCAACC 239 Query 20258 ATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCC 20317 || ||||| | |||| |||||||| ||||||||||| || |||| |||||||| | Sbjct 238 ATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCA 179 Query 20318 GACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAG 20377 ||||||||||| ||||| || || ||||| |||| || ||||| || || | || Sbjct 178 GACCTCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAG 119 Query 20378 TGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATT 20437 || || |||||||| |||||| | | ||| | |||||||| || ||| |||||| Sbjct 118 TGGCAAGGCGGAAGAGCCATCTGAGGGATGTCGACTGGGTTCCAGGCGGTCATGATGATT 59 Query 20438 C 20438 | Sbjct 58 C 58 >seq3509 Length=1415 Score = 136 bits (150), Expect = 3e-27 Identities = 177/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 20198 TGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGC 20257 || |||||||| || || || | ||| || || || | | || || || ||||||| | Sbjct 1118 TGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACGTGAGCAACC 1177 Query 20258 ATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCC 20317 || ||||| | |||| |||||||| ||||||||||| || |||| |||||||| | Sbjct 1178 ATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCA 1237 Query 20318 GACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATA-AAATTGACATAACAA 20376 ||||||||||| ||||| || || ||||| |||| || ||||| || | ||| ||| Sbjct 1238 GACCTCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAA 1297 Query 20377 GTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGAT 20436 || || |||||||| |||||| | | ||| | |||||||| || ||| ||||| Sbjct 1298 -TGGCAAGGCGGAAGAGCCATCTGAGGGATGTCGACTGGGTTCCAGGCGGTCATGATGAT 1356 Query 20437 TC 20438 || Sbjct 1357 TC 1358 >seq650 Length=6480 Score = 93.3 bits (102), Expect = 4e-14 Identities = 168/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 20527 GTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCT 20586 |||| | || ||||||||||||||||| || || || || ||||||||||| ||||| Sbjct 150 GTACTCTGCTCCAAAGTGCCTCCACTGAAACCCATATACTGGTCCCAAATCGCCCTCTTC 209 Query 20587 TCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTT 20646 | | | | ||||| | | ||||| |||| || || || |||||| || | Sbjct 210 GCGATTGGTGAAGCCGCACTTATCGAGGAATTCCCGGGCGCTGTTCCCGTCCCAGAT-AT 268 Query 20647 GACTCCTGTTCT--TGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGC 20704 || | | |||| || ||| || ||| ||| || ||||| || | ||||| || ||| Sbjct 269 GAATGTTTTTCTCCTG-AAGGGCCTTGGCGTCCGTGCTCCCTTTGATGAACCACAGGAGC 327 Query 20705 TCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAAAGTGGTCCCGC 20764 || | | || |||||||| || || |||||||| || | ||||| ||| ||||| Sbjct 328 TCCTCAGCAACACCTCGCCAGAAAACACGCTTTGTAGTCAACAAGGGGAAGGACTCCCGG 387 Query 20765 AG 20766 || Sbjct 388 AG 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441291725333800