Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2612 89.7 4e-13 seq2536 89.7 4e-13 seq521 89.7 4e-13 seq2653 86.0 5e-12 seq2353 86.0 5e-12 seq10 84.2 2e-11 seq408 82.4 6e-11 seq300 82.4 6e-11 >seq2612 Length=1670 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 ||| |||| |||||||||||||||| |||||||||||||||| | ||||||| |||| Sbjct 1666 CATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACC 1607 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 1606 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1576 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 ||| |||| |||||||||||||||| |||||||||||||||| | ||||||| |||| Sbjct 1666 CATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACC 1607 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 1606 ATAACTGATATAATGAGCCTTTTGCGGTTTC 1576 >seq2536 Length=1703 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 ||| |||| |||||||||||||||| |||||||||||||||| | ||||||| |||| Sbjct 46 CATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACC 105 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 106 ATAACTGATATAATGAGCCTTTTGCGGTTTC 136 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 ||| |||| |||||||||||||||| |||||||||||||||| | ||||||| |||| Sbjct 46 CATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACC 105 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 106 ATAACTGATATAATGAGCCTTTTGCGGTTTC 136 >seq521 Length=12490 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| ||||||||||||||| | ||||||| |||| Sbjct 8992 CATGTATTAGCTCTAGAATTACCACAATTATCCAAGTAACTGTTAACGATCTAATAAACC 8933 Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATC 115619 | |||||||||| |||||| || | ||| || Sbjct 8932 ATAACTGATATAATGAGCCTTTTGCGGTTTC 8902 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/91 (84%), Gaps = 2/91 (2%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| ||||||||||||||| | ||||||| |||| Sbjct 8992 CATGTATTAGCTCTAGAATTACCACAATTATCCAAGTAACTGTTAACGATCTAATAAACC 8933 Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATC 114422 | |||||||||| |||||| || | ||| || Sbjct 8932 ATAACTGATATAATGAGCCTTTTGCGGTTTC 8902 >seq2653 Length=1653 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 115539 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 115597 |||||||||||||||| |||||||||||||||| | ||||||| ||||| ||||||| Sbjct 1650 GCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACCATAACTGAT 1591 Query 115598 ATATTGAGCCATTCGTGGTATC 115619 ||| |||||| || | ||| || Sbjct 1590 ATAATGAGCCTTTTGCGGTTTC 1569 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 114342 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 114400 |||||||||||||||| |||||||||||||||| | ||||||| ||||| ||||||| Sbjct 1650 GCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACCATAACTGAT 1591 Query 114401 ATATTGAGCCATTCGTGGTATC 114422 ||| |||||| || | ||| || Sbjct 1590 ATAATGAGCCTTTTGCGGTTTC 1569 >seq2353 Length=1800 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 114342 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 114400 |||||||||||||||| |||||||||||||||| | ||||||| ||||| ||||||| Sbjct 4 GCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACCATAACTGAT 63 Query 114401 ATATTGAGCCATTCGTGGTATC 114422 ||| |||||| || | ||| || Sbjct 64 ATAATGAGCCTTTTGCGGTTTC 85 Score = 86.0 bits (94), Expect = 5e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 115539 GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCAAAACTGAT 115597 |||||||||||||||| |||||||||||||||| | ||||||| ||||| ||||||| Sbjct 4 GCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAATAAACCATAACTGAT 63 Query 115598 ATATTGAGCCATTCGTGGTATC 115619 ||| |||||| || | ||| || Sbjct 64 ATAATGAGCCTTTTGCGGTTTC 85 >seq10 Length=2329298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||||||||||| | |||||| |||||||| || ||| || || || |||||||| | Sbjct 1253194 ACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGA 1253135 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || | || ||||| || || || ||||| || || ||||| ||||| || Sbjct 1253134 GAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGG 1253075 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076 | || |||||||| | | | |||| |||| | | || || |||||| | ||| Sbjct 1253074 AATGCCCTCTTTGT-CTTGAATTTTAGCTT--TCACATTCTCAATTGTATCAGAGGGTTC 1253018 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || || || || || |||||||| || |||||||| Sbjct 1253017 AACTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 >seq408 Length=31413 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/194 (71%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 37826 CACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCA 37885 |||| ||||||||| |||| | || || || |||||||| || || || ||||| Sbjct 25632 CACG-ACGATCTCT---GGAATTCTGCCCAGATCCAGCTTGTCAAAGAAGGGAAAATGCA 25577 Query 37886 TCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC 37945 | | | || | ||||| ||| ||| |||||| | |||||| |||| || |||| Sbjct 25576 TGGCTTTTTGAGGATGTACTGGGCCAAAAAAATTCTCGAATGGACTGA--ATCTCCAGAA 25519 Query 37946 CGCGC--TCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCC 38003 | || | | || | ||||||||||| ||||||||||| ||||| || | ||||| Sbjct 25518 CAAGCATTGGAATATTCTATTTATCTCAACGATAAGTACAGTTTGGATGGACAAGATCCA 25459 Query 38004 AACGGTTACGTCGG 38017 || || ||||| || Sbjct 25458 AATGGATACGTAGG 25445 >seq300 Length=83415 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| |||||||||||||||| ||||||||||||||| | |||||| |||| Sbjct 66514 CATGTATTAGCTCTAGAATTACCACAATTATCCAAGTAACTGTTAATTATCTAATAAACC 66573 Query 114392 AAAACTGATATATTGAGCCATT 114413 | |||||||||| |||||| || Sbjct 66574 ATAACTGATATAATGAGCCTTT 66595 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| |||||||||||||||| ||||||||||||||| | |||||| |||| Sbjct 66514 CATGTATTAGCTCTAGAATTACCACAATTATCCAAGTAACTGTTAATTATCTAATAAACC 66573 Query 115589 AAAACTGATATATTGAGCCATT 115610 | |||||||||| |||||| || Sbjct 66574 ATAACTGATATAATGAGCCTTT 66595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396991287985390