Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq10 140 3e-28 seq44 95.1 1e-14 seq39 91.5 1e-13 >seq10 Length=2329298 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| ||||| ||||||| || || |||||||| || |||||||| | Sbjct 1253194 ACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGA 1253135 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || | || || | ||| || || ||| | || || ||||| || || || || Sbjct 1253134 GAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGG 1253075 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| || ||||| ||||| ||||| ||||| ||| ||| | ||||||| || || | Sbjct 1253074 AATGCCCTCTTTGTCTTGAATTTTA-GCTTTCACATTCTCAATTGTATCAGAGGGTTCAA 1253016 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | |||||||| || | |||||| |||||||||||||| Sbjct 1253015 CTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||||||||| || || || ||||| ||||||||||| | | ||||| | ||| Sbjct 1253862 AGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCT 1253803 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | |||||| |||||| | || | || ||||| || || ||||| |||||||| || Sbjct 1253802 TCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCC 1253743 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| ||| | ||||| | || || || | || | ||| Sbjct 1253742 TGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTC 1253683 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || ||||||||||| || |||||||| |||||| Sbjct 1253682 TTACCGGTCAAAGTCTTAACGAAAATCTGCATT 1253650 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | |||||| | |||| ||||| ||||| || || ||||| || | Sbjct 1254562 ACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGA 1254503 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | || || | || || || ||| |||| | || ||||| || || || Sbjct 1254502 TAATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGG 1254443 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| |||||||| ||||| || || ||||||| || | || ||| || || || Sbjct 1254442 AATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGAC 1254383 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||| || || ||||| ||||| ||||||||||| Sbjct 1254382 TTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| |||||||| |||||||| | | ||||| | ||||| | ||||| || Sbjct 1254303 GTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCCAATTGCTTTCCA 1254244 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || || ||||| || || ||||||||||| || || || ||||| ||| Sbjct 1254243 GCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATTTTAGCCTTA 1254184 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || ||||| | |||| || || || ||||||||| Sbjct 1254183 ACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTACCAGTCAAAGTT 1254124 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| || |||||| Sbjct 1254123 TTCACGAAGATCTGCATT 1254106 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | |||||| || ||||| | || || || || || ||||| ||||| | Sbjct 1255245 CCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGAC 1255186 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| | || || || || || |||||| |||| | || ||||| || |||||| Sbjct 1255185 AGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGA 1255126 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 |||||||| || || || ||||| ||| ||| || | |||||| | || ||| Sbjct 1255125 ATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACT 1255066 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | ||| | || || || ||||| || || || ||||| |||||| Sbjct 1255065 TCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATT 1255018 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||| | ||||| || ||||||||||| ||||| | | ||||| | || Sbjct 1252951 AAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATC 1252892 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| ||||| ||||| ||| | || | | |||||||| ||||||||||| ||||| || Sbjct 1252891 TTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATC 1252832 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | |||||| | || ||||| | || | || Sbjct 1252831 CTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGT 1252772 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||||| || | || || || || || |||||||| Sbjct 1252771 TTTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTT 1252736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || ||||| ||||||||||| | | ||||| | || Sbjct 1254090 AGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCC 1254031 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || |||||| | ||||| || ||||| || || || || || || || ||| Sbjct 1254030 TCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTATCT 1253971 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| ||| ||| | ||||| | || ||||| | ||| | || Sbjct 1253970 TGGA-TCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGATAGT 1253912 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| ||||| || ||||| || || |||||| Sbjct 1253911 TTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || ||||| || ||||| | | ||| || | || || | || || || Sbjct 1253619 GTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCCAATTGTTTCCCA 1253560 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| || ||||| || |||||||||||||| || ||||| || ||| ||| Sbjct 1253559 GCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTC 1253500 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || ||| | || ||||| | || | || ||||| || | |||| Sbjct 1253499 ACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTGCCAGTAAGAGTT 1253440 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 1253439 TTCACGAAAATCTGCAT 1253423 >seq44 Length=1094211 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | || | || ||||| ||||| || ||||| || | | || || | || Sbjct 805554 AAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATC 805495 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || | || || || ||| | || || || || || || || ||||| |||||||| || Sbjct 805494 CTCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATC 805435 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| || ||| ||||| ||| || | |||||| || || || || | ||| | || Sbjct 805434 TTGAATCTTT-GCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGG 805376 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| || | || ||||||||||||||||| Sbjct 805375 TCTTGCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 >seq39 Length=1160777 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| | | ||||| | || |||||||| || ||| Sbjct 535119 GTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTGTTTACCG 535060 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || ||||| || || || || ||||| || || || || | | || ||||| Sbjct 535059 GCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTGGA-TCTTCGCTTT 535001 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || || || || || || | ||| | |||||| ||||| | || Sbjct 535000 GACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTTACCGGTTAGGGT 534941 Query 64426 TTTTACGAAAATTTGCATTTTAAT 64449 ||||||||| || ||||| || || Sbjct 534940 TTTTACGAAGATCTGCATGTTTAT 534917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499553021495800