Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq10 125 5e-24 seq44 93.3 3e-14 seq39 87.8 1e-12 >seq10 Length=2329298 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| | || | |||||||||||| |||||||| || ||||||||| | Sbjct 1253193 CCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAG 1253134 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || || ||||| ||||| | || | ||||||||| || |||| Sbjct 1253133 AGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGA 1253074 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || || ||||| |||||| ||| ||| | || || ||||| ||| || Sbjct 1253073 ATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACT 1253014 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || || || |||||||| || ||||||||||| Sbjct 1253013 TCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 125 bits (138), Expect = 5e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023 || ||||||||| || || || || || || ||||| || ||| |||| | | | || Sbjct 1253407 TAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCATC 1253348 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 || | ||||| ||||| | |||||||||||||| || ||||| ||||| || || Sbjct 1253347 CTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATC 1253288 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 |||||| ||| ||| |||| || ||||| | || || ||||| ||||| || Sbjct 1253287 TTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGT 1253228 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||| || ||||| |||||||||||||| |||||| Sbjct 1253227 TTTCCCAGTCAGTGTTTTTACAAAAATCTGCATA 1253194 Score = 107 bits (118), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||||| | | || || |||||||| || ||||| || || ||||| || | Sbjct 1254561 CCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA--G 1254504 Query 15010 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| || || |||||||| ||||| | |||||||| || || || || Sbjct 1254503 ATAATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTG 1254444 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||| ||||| ||| || |||||| |||| ||||| || || | Sbjct 1254443 GAATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGA 1254384 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || ||||| ||||| || || || | ||| |||||||||||||||||| Sbjct 1254383 CTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCATA 1254334 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | ||| | || | ||| | ||| || || || || ||||| |||||| Sbjct 1255245 CCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGAC 1255186 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | || || | |||||| || || | |||||||| || || || ||| Sbjct 1255185 AGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGA 1255126 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||||||||| || ||||| || ||| |||| || ||||| | ||| || Sbjct 1255125 ATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACT 1255066 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || |||||||| |||| || || |||||||| ||||| Sbjct 1255065 TCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCAT 1255019 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || || ||||| || ||||| || |||||||| || | | | ||||| Sbjct 1254315 ACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCC 1254256 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || ||||| | || | ||| || || || |||||||||||||| || | Sbjct 1254255 AATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGA 1254196 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| || ||| |||| || |||||| ||| || || || || || |||||| Sbjct 1254195 ATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTA 1254136 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| |||||| || || || ||||| Sbjct 1254135 CCAGTCAAAGTTTTCACGAAGATCTGCAT 1254107 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||||| |||||| || || || ||||| |||||||||||| | | | | | ||||| Sbjct 1253860 AACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCTTC 1253801 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || || || || || | ||||| || || || || |||||| ||||| ||||| Sbjct 1253800 CAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCCTG 1253741 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| || ||| | || || ||||| ||| || || || ||||| || || Sbjct 1253740 GATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTCTT 1253681 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| |||| ||| || || ||||| ||||| Sbjct 1253680 ACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || || ||||| ||||| ||||| || | | | |||||| Sbjct 1252947 ACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCT 1252888 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||||||||||| | ||||| | || ||||| |||||||| || || || | Sbjct 1252887 AGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGA 1252828 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || || |||| || ||||| | || || || ||||| || ||||| Sbjct 1252827 ATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTG 1252768 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 ||||| || || || ||||| || ||||| || Sbjct 1252767 CCTGTTAGTGTCTTCACAAAGATCTGCATTTT 1252736 >seq44 Length=1094211 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || || ||||| || ||||| ||| || | | | || || Sbjct 805550 ACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTCC 805491 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 |||||||| ||||| | |||| ||| ||||| || ||||| ||||| || || | Sbjct 805490 AATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTGA 805431 Query 15088 AT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || |||||||| ||| |||| |||||||| ||| || || | || ||||| || Sbjct 805430 ATCTTTGCTTTG-ACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCTT 805372 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || ||||| ||||||||||| Sbjct 805371 GCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 >seq39 Length=1160777 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || || || |||||||| || || || |||||||||||| Sbjct 535149 CCACCTCGGAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAA 535090 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | ||||| || ||| | |||| ||||||||| || || Sbjct 535089 AGTGTGCGACCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGG 535030 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| || || ||| ||| |||| ||||| || || || Sbjct 535029 ATTCCCTCCTTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACC 534970 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 || | || ||||| ||||| || || |||||||| || || ||||| ||| Sbjct 534969 TCAAGAGTGATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCATGTTT 534919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357327992768075