Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq13 176 4e-39 seq44 141 8e-29 seq10 122 8e-23 >seq13 Length=2077869 Score = 176 bits (194), Expect = 4e-39 Identities = 508/770 (66%), Gaps = 25/770 (3%) Strand=Plus/Plus Query 123587 TATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAA 123646 ||| || ||| | || || || || ||||| || || ||| | ||||| ||||| ||||| Sbjct 1820320 TATAATTGAATCTCAGGTAGAGACAGGAACTCCTTATATGTTATACAAGGACGCATGCAA 1820379 Query 123647 CAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAAT 123706 ||| || | || ||| || | || || || |||||||| ||||| ||| | ||||| Sbjct 1820380 CAGAAAGAGTAACCAGCAGAATATCGGGACTATTAAATGTAGCAATCTATGCACAGAAAT 1820439 Query 123707 TATCGAATACAGCGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGA 123765 | | || ||| | ||||| || | ||||| ||||||||||| || | ||||| ||| Sbjct 1820440 TGTAGAGTACTCGGCCGCCGACGAAATAGCCGTATGTAATTTGGCCTCTA-TTGCGTTGA 1820498 Query 123766 A-----TCGTTGCGTCGAAAACGGCGCTTTTAATTTCCAAACGCTCAAACGCA-TAACAA 123819 | |||| || || ||| | | | | | ||||| | | || ||| | || | Sbjct 1820499 ACATGTTCGTCACGCCGGAAAAGAAG--TATGACTTCCAGA-AATTGAAGGCAGTTACTA 1820555 Query 123820 AAACTGTAGTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAG 123879 |||| || | |||| | ||||| ||||||||| |||| | ||||| || |||| Sbjct 1820556 AAACAGTGACGAGGAATCTAAACAAGATTATCGATATTAACTACTATCCGATGCCAGAAG 1820615 Query 123880 CGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACG 123939 | ||| || |||| ||| | ||| | || | || | ||||| |||| || Sbjct 1820616 CTAAGAAGTCCAACATGAAGCACCGCCCGATTGGCATAGGTGTGCAAGGCATGGCTGATA 1820675 Query 123940 CGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAGC---AAAGTTGCTTAATACGC 123996 | || | || |||| || ||||||||||| || || ||| ||| ||| || Sbjct 1820676 CATTCATTCTGATGCGTTACCCCTACGAAAGCGAGGAGGCTCAAAAATTG---AATCAGC 1820732 Query 123997 AAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAA--AAT 124054 | || ||||| ||||| ||||| || | || || ||||||||||| || || ||| Sbjct 1820733 AGATTTTTGAAACTATTTACTACGGAGCCCTTGAAGCCAGCTGCGAACTAGCTAAAGAAT 1820792 Query 124055 TCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGA 124114 | || ||||||||| |||| ||| |||| ||| ||| || | |||||||| Sbjct 1820793 T--TGGACCGTACGAAACCTACGAGGGATCGCCGGTCAGCAAAGGAATACTCCAGTACGA 1820850 Query 124115 CATGTGGAATGCTACACCGACAAATTTGTGGGACTGG--AGCGTTTTAAAACAACGCATA 124172 |||||| | || || || ||||| ||||||||| | | || | | || ||| Sbjct 1820851 TATGTGGGACAAAACGCCCACCAATTTATGGGACTGGGCGGAGCTTAAGGAGAA--AATA 1820908 Query 124173 TCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCT 124232 | | | || | | || || |||| ||||| ||||| || ||| | ||| | Sbjct 1820909 AAGCAGTATGGCGTTAGGAATTCCTTGTTATTGGCGCCGATGCCCACAGCATCTACTTCA 1820968 Query 124233 CAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGA 124292 |||||| | || ||||| || ||||| ||||| | ||| || | ||| || || Sbjct 1820969 CAAATTCTTGGCAACAATGAGTCCTTTGAGCCCTACACCTCGAACATTTACCATCGTCGT 1821028 Query 124293 GTGTTAGCCGGCGATTTTCAAGTGATAAATCATCATTTGGTGGACGACTT 124342 ||| | | || || ||| ||| |||| || ||| | ||| |||||| Sbjct 1821029 GTGCTTTCGGGTGAATTTATAGTCGTAAACCACCATCTTTTGGCCGACTT 1821078 >seq44 Length=1094211 Score = 141 bits (156), Expect = 8e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| | || || |||||||||||||||||||| || ||| | Sbjct 805568 CCACCACGGAGGCGAAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCG--G 805511 Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || || | || ||| ||||||||||| || || | |||| ||||| || || || | Sbjct 805510 ACAGTGTACGACCATCCTCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGG 805451 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 |||| ||||||||||||||||| ||| ||||| ||| | || || || | |||| Sbjct 805450 GAATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGA 805391 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| | || ||||| ||||| || ||||| ||||||||||| Sbjct 805390 CCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 >seq10 Length=2329298 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | || || ||||| || ||||| ||||||||||| || |||||| Sbjct 1254108 ATTCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCG 1254049 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || |||||||| || || | || | ||||||||| ||||| Sbjct 1254048 GACAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGT 1253989 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || |||||||| || || ||| | || | ||| ||||| | |||| Sbjct 1253988 GGGATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCG 1253929 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | |||||||| || | || |||||||| || ||||| Sbjct 1253928 ACTTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || |||||||| || | | |||| ||| || || |||||||| || || ||||| ||| Sbjct 1253424 ATACCTCCGCGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCG 1253365 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| || | ||||| || || | ||||| || || || || || Sbjct 1253364 GAGAGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGA 1253305 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||||||||| ||||| ||| | ||| | || || |||| ||| Sbjct 1253304 GGAATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCA 1253245 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | |||| ||||| || || || |||||||||||||| ||||| Sbjct 1253244 ACTTCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || ||||| | | || | || || || || ||||| || ||||||||||| Sbjct 1253652 ATTCCACCCCGGAGACGTAGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCA 1253593 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||||||||| || || | || | ||||||||| || || Sbjct 1253592 GATAAGGTACGGCCATCCTCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGA 1253533 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| ||||||||||| ||| || | ||| | ||||| |||| || Sbjct 1253532 GGAATTCCTTCCTTATCTTGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCA 1253473 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | || | ||||||||| || |||||||| || ||||| ||||| Sbjct 1253472 ACTTCCAATGTGATCGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||| ||| ||||| || || || || ||||||||||| |||||| || || | | Sbjct 1253181 CTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACCA 1253122 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| |||||||| || | || | || || || || || |||||||| ||||| Sbjct 1253121 TCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTTG 1253062 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||||||||| ||| | || | || || || | || ||||| | || | | Sbjct 1253061 TCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGATC 1253002 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || |||||||| || |||||||||||| Sbjct 1253001 GTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCATC 1252966 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||||||||| || || | ||||| |||||||| || || |||||||||||||| Sbjct 1254490 ATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTT 1254431 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || || | ||| | ||||| || | ||||||||| | || | Sbjct 1254430 GTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGAT 1254371 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || |||| ||| ||||||||||||||||| Sbjct 1254370 GGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || || || | || |||||||| || ||||| ||||||||||| || |||||| Sbjct 1253880 ATTCCACCACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCG 1253821 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| ||||| || || || || | |||||||||||||| || || Sbjct 1253820 GACAAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGT 1253761 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||| || || ||||| || | || | || || || | || Sbjct 1253760 GGAATACCTTCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCA 1253701 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | |||| || || ||||| | ||| || || ||||| ||||| Sbjct 1253700 ACCTCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAATT 45195 || || || ||||||||||| ||||| |||| | || || | | ||| ||||||| Sbjct 1254309 TGGAGAGTAGATTCCTTTTGAATATTGTAAT--CAGAAAGTGTGCGTCCATCTTCCAATT 1254252 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 | ||||| || | || | |||||||| || || ||||| ||||| ||||| ||||||| Sbjct 1254251 GCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATTT 1254192 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | || | ||| | ||| ||||| | |||||||| | || | |||||| || | Sbjct 1254191 TAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTACCAG 1254132 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | | |||||| || || || ||||| Sbjct 1254131 TCAAAGTTTTCACGAAGATCTGCAT 1254107 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || ||||| | | || | ||| || || |||||||| ||||| ||||| ||| Sbjct 1255020 ATTCCACCACGGAGGCGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCG 1254961 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | || |||||||| || || || | || | ||||| || || || Sbjct 1254960 GACAAAGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGA 1254901 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| |||||||| || ||||| || || | || | || | ||||| || | || Sbjct 1254900 GGAATCCCTTCTTTGTCCTGAATCTTGGCCTTAA-CGTTCTCAATTGTGTCTGACGGTTC 1254842 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | ||||||||||||| ||| || || || |||||||| Sbjct 1254841 AACCTCCAAAGTGATAGTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451920172662200