Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10 145 2e-29 >seq10 Length=2329298 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||| ||||| | ||||||||| || |||||||| | ||||| |||| | || Sbjct 1254327 CGAAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTG 1254268 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| |||||||| || ||||| ||||| ||||| || || ||||||| Sbjct 1254267 CGTCCATCTTCCAATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCT 1254208 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || |||||||| || ||| || ||||| ||| || | || ||| || ||||| Sbjct 1254207 TCCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAAT 1254148 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||| || | ||||||||| || || || Sbjct 1254147 GTTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTG 1254110 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||||||||| |||||||| || | || |||||||| |||| ||| || || | || ||| Sbjct 1255240 TCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGT 1255181 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||| || || || || ||||| || || | ||| ||||| || ||| |||||| Sbjct 1255180 GCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCC 1255121 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| ||||| || || ||| || ||| | ||| || | | ||| || ||||| Sbjct 1255120 TTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAA 1255061 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| |||||||| | || ||||||||||| || Sbjct 1255060 AGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTG 1255022 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || || || || ||||||||||||| |||||| || | |||||| Sbjct 1253871 CGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTG 1253812 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||| |||||| ||||| ||||| | || ||||| || || ||| ||| Sbjct 1253811 CGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCT 1253752 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| || || ||| || |||| || |||| || ||| || ||||| Sbjct 1253751 TCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAAT 1253692 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || | ||| || || ||||| || Sbjct 1253691 GTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTG 1253654 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| || ||||| |||| ||| ||||| | |||||| | || ||||||| ||| Sbjct 1254993 TGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCCAATTGC 1254934 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || ||||| ||||| || || || ||| ||| |||||| ||||||||||| Sbjct 1254933 TTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGAATCTTG 1254874 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | ||||||| | ||| || ||||| ||||| || || || || Sbjct 1254873 GCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTGCCGGTT 1254814 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||| ||||| || ||||| Sbjct 1254813 AAAGTCTTCACGAAGATTTG 1254794 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || |||||||| || | || || |||| || || | ||||| Sbjct 1253634 AGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCC 1253575 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| || || || || |||||||| || ||||| || ||| ||||||||| || Sbjct 1253574 TCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCT 1253515 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| |||||| ||| | ||||| | | ||| || ||||| |||||||| Sbjct 1253514 TGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTT 1253455 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||||||||| ||||| || Sbjct 1253454 TTGCCAGTAAGAGTTTTCACGAAAATCTG 1253426 Score = 122 bits (134), Expect = 2e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 |||||| ||||| || || || ||||| ||||||| ||||| || | | || | || Sbjct 1253182 TCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACC 1253123 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| |||| ||| ||||| || ||||| |||||||| || || || ||| || ||| Sbjct 1253122 ATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTT 1253063 Query 199534 CTCCTGAATCTTTTGCTT-CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || ||||| ||| |||| ||| || | || || | | ||| || ||||| |||| Sbjct 1253062 GTCTTGAAT-TTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGA 1253004 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||| || || ||||||||||| |||||||| Sbjct 1253003 TCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTG 1252970 Score = 120 bits (132), Expect = 7e-22 Identities = 163/227 (72%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | || || |||||||||||||| | ||| || |||| || || Sbjct 1252959 CGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTG 1252900 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| || || || ||||| | | |||||||| ||| |||||| Sbjct 1252899 CGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCC 1252840 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||||||||| ||| ||| ||| | ||| || | | || || ||||| Sbjct 1252839 TCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAG 1252780 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| || || || || || || |||||||| || || |||||| Sbjct 1252779 GTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTG---CATTTT 1252736 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||||||||| || | ||||||||| |||||||| || | ||| ||||| | | || Sbjct 1254783 CGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTG 1254724 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| ||||||| ||||| || || || || | | ||||||||| || || ||| Sbjct 1254723 CGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCT 1254664 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| |||||| ||| | ||||| | | ||| || ||||| Sbjct 1254663 TCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAA 1254604 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || | || || |||||||| || Sbjct 1254603 GTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTG 1254566 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || |||||||| || |||| |||||||||| || || | ||||| Sbjct 1254546 AGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGCCCATCC 1254487 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| || || || || || || | ||| ||||| || || ||| |||||| || Sbjct 1254486 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCT 1254427 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || ||| | ||||| | | || || ||||| ||||| ||| Sbjct 1254426 TGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGATGGTC 1254367 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | ||| || ||||||||||| Sbjct 1254366 TTCCCAGTTAAAGTCTTTACAAAAATTTG 1254338 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || || |||||||| ||||||||||||| |||||| || | |||||| Sbjct 1254099 CGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTG 1254040 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || | || || ||||| |||||||| || ||||| ||||| || || Sbjct 1254039 CGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCC 1253980 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| || || || | ||| || | || || || |||| Sbjct 1253979 TCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGA 1253920 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || | || || ||||| || || Sbjct 1253919 GTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTG 1253882 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| ||||| ||||||||||||||||| | |||||| ||||||||||| |||| || Sbjct 1253780 ATCTTTGCCGGTAAGCAGTTGGAAGATGGTCGCACTTTGTCCGATTACAACATCCAAAAG 1253839 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACTTCG 201029 ||||| || ||||| || ||| || | || || Sbjct 1253840 GAGTCAACACTTCATCTAGTTCTGCGTCTACG 1253871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178699633009565