Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq10 118 7e-22 seq39 84.2 2e-11 >seq10 Length=2329298 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || ||||||||||| | |||| ||| || || || ||||| |||| |||| ||| | Sbjct 1255005 CGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCG 1254946 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||||||| || || |||| || | ||| || ||||| | || | ||||||||| Sbjct 1254945 TCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTG 1254886 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || || || |||| || | | |||||||| ||| || |||||||| || Sbjct 1254885 TCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATA 1254826 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || |||||||| || |||||||| ||||| Sbjct 1254825 GTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCT--TTTTGTATATTATAATCGG 39550 || || || | |||||| || | ||| ||||| | || ||||| || || ||||||| Sbjct 1253877 CCACCACGTAGACGCAGAACTAGATG--AAGTGTTGACTCCTTTTGGATGTTGTAATCGG 1253820 Query 39551 CCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 |||| ||| |||| ||||| || || ||| |||| || || || |||||||| | | Sbjct 1253819 ACAAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTG 1253760 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | ||||||||||| ||||| |||| || | | || |||| ||| | Sbjct 1253759 GAATACCTTCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAA 1253700 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | ||||| |||||||| ||||| || ||||| || ||||| |||||||| Sbjct 1253699 CCTCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || ||||| || | ||| ||| ||||| ||||| ||||| | | |||| || Sbjct 1254321 CGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCA 1254262 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||||||| || || |||| || | ||| |||||||| | ||| | ||||| || Sbjct 1254261 TCTTCCAATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTA 1254202 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || ||||| |||| | | | || || | ||| || ||||| || || Sbjct 1254201 TCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATC 1254142 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || |||||||| |||||||||||||| Sbjct 1254141 GTTTTACCAGTCAAAGTTTTCACGAAGATCTGCAT 1254107 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||||| || || ||||| || | || ||||| || ||||| || || | Sbjct 1254561 CCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAT 1254502 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| ||||||||||| || ||||||| ||||| |||||||| | || Sbjct 1254501 AATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGA 1254442 Query 39613 ACGCCTTCTTTGTC--GCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | |||||||||||| | || || || || || || ||||| | | || | Sbjct 1254441 ATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATA--GTGTCAGAGGGCTCGA 1254384 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | ||||| || || || || || |||||||| ||||| || || ||||| Sbjct 1254383 CTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | |||||| |||| ||| | ||| || ||||| || || ||||||| | Sbjct 1254105 CCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGAC 1254046 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| ||| |||| || |||||||| ||| |||| || | || |||||||||| || Sbjct 1254045 AAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGG 1253986 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || || || || || || ||||| || | | || || | || || Sbjct 1253985 ATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACT 1253926 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||| || ||||| || || || || ||||| ||||||||||| Sbjct 1253925 TCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 >seq39 Length=1160777 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | ||| || ||||| |||| || || || || || || ||||||| Sbjct 535149 CCACCTCGGAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAA 535090 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | ||| |||| || | ||||| ||| | ||||| | |||||| ||||| | ||| Sbjct 535089 AGTGTGCGACCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGG 535030 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || || ||||| || || ||| | | | | ||||||| | || || Sbjct 535029 ATTCCCTCCTTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACC 534970 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGT 39721 || | ||| || || ||||| |||| |||||||||||||||||||||| Sbjct 534969 TCAAGAGTGATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCATGT 534921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347307387732935