Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq170 163 3e-35 seq39 147 2e-30 seq44 118 1e-21 seq10 116 4e-21 >seq170 Length=322284 Score = 163 bits (180), Expect = 3e-35 Identities = 291/425 (68%), Gaps = 0/425 (0%) Strand=Plus/Minus Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTA 132771 || ||||| || |||| ||| || |||||||||||||| || |||| ||| || Sbjct 24422 AGCTCGACCAGAAGCCGGTCTGCGACGAACTCGATGTACTGGCACATCAACATGCAGTTC 24363 Query 132772 AGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCG 132831 | || | ||| || || || || ||||| | ||| | || || || || || Sbjct 24362 ATCCCAATAAGATTTACAGGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTTACTGCC 24303 Query 132832 TCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATC 132891 || | || || || ||| || || ||| ||| || || | ||| |||||||| Sbjct 24302 TCTGAGATTATCTCGATAATTCGATCCCTGCTGGGCTTCTGTACAAGATGTTTGAACATT 24243 Query 132892 AAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTC 132951 || |||||||| |||||||| ||||| ||||| | ||| || ||||||||| |||||| Sbjct 24242 AAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTC 24183 Query 132952 AAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAG 133011 | || ||||| | ||| | || |||||||| || || | || |||||||| ||| Sbjct 24182 AGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTGAAG 24123 Query 133012 AAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTG 133071 |||| |||||||| || || ||||| | | | || ||||| | ||| ||||| Sbjct 24122 AAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATTAGCTGACTTGCTT 24063 Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCG 133131 | ||||| || ||||| || ||||| | ||| || || || | ||||| || ||| Sbjct 24062 GATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGGTTTCAATTGCG 24003 Query 133132 TTCAA 133136 || || Sbjct 24002 TTGAA 23998 Score = 102 bits (112), Expect = 8e-17 Identities = 166/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 |||||||||||||| || || || ||||| ||||| |||||||| || | || || || Sbjct 23888 TACATTTCCGAGTGGACATTTTCTATGGCAATTTGGAAGCCGTAGAAAAAGCGAGCTTCC 23829 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 | ||||| || || ||||||||| || |||||||| || || || |||||| | Sbjct 23828 GGGATTTGCACCTCCTGGCTGAAACGCTCCACGAGATTTTCATTTACAATTCCGTCGGAG 23769 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368 || ||||| || || |||||||| ||||| || ||| | | | |||| Sbjct 23768 GCAGCGAAGAAAGCTAGCACGTGTGAAATGAAGTGCTTCTCACCGGCTGATAGTTTCTCC 23709 Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || | | ||| || || |||| || ||||| || ||||||||||| || || || Sbjct 23708 CAATGCTGTAAGTCATTCGAAAGGTTTACTTCCTCCACTGTCCAAAACGAGGCTTCAGC 23650 >seq39 Length=1160777 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||||||||| || || || || |||||||| | || |||||| | Sbjct 534919 AAACATGCAGATCTTCGTAAAAACCCTAACCGGTAAGACCATCACTCTTGAGGTCGAGCC 534978 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | | |||| | ||| | |||| || |||| ||||| |||||||| ||| | || Sbjct 534979 CTCAGACACTATTGAAAATGTCAAAGCGAAGATCCAGGACAAGGAGGGAATCCCCCCAGA 535038 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 |||||||| || |||| ||| || |||||||| || || | ||||| || ||| || Sbjct 535039 TCAACAGCGTCTGATTTTCGCCGGTAAACAGCTTGAGGATGGTCGCACACTTTCCGATTA 535098 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||| ||||| | || ||||| |||||||| ||| | |||| || Sbjct 535099 CAACATCCAGAAGGAGTCTACCCTGCACTTGGTGCTCCGTCTCCGAGGTGG 535149 >seq44 Length=1094211 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| |||||||| || || |||||||| |||||||| | || ||||| || | Sbjct 805342 ATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCT 805401 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| | |||| ||| || | || ||||| || |||||| | || ||| Sbjct 805402 GATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 805461 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | || || ||||| |||| || | || || || ||||||||| Sbjct 805462 CAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAAT 805521 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||||| | || || || |||||||| || Sbjct 805522 ATCCAAAAGGAATCAACCCTCCACTTGGTGCTTCG 805556 >seq10 Length=2329298 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| || || ||||| || |||||| | || || || || | Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | |||| ||||| | ||||||||||| ||||| | || ||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAA 1253086 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || |||||| |||| || | || || ||| ||| ||||| Sbjct 1253087 CAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAAT 1253146 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || | || || ||| | |||||| | |||||||| || Sbjct 1253147 ATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGG 1253193 Score = 105 bits (116), Expect = 7e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || || || || || || || |||||||| |||||| | || || ||| | Sbjct 1252736 AAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCCT 1252795 Query 38301 ACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | || | | | | ||||| |||| | || || | || |||||||||||||| | || Sbjct 1252796 TCTGATACCATTGAAAACG-TTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGA 1252854 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| || | | || | || ||||||||||| || || | ||||| || || || Sbjct 1252855 CCAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTA 1252914 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||||| |||| || |||||||| || ||| Sbjct 1252915 TAACATTCAAAAGGAGTCGACCCTACATTTGGTCCTTCGT 1252954 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || ||||| || | || |||||||| ||||| | || |||||| | | Sbjct 1253878 AATGCAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATC 1253937 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | | |||||| || |||| || || ||||| || || | || || Sbjct 1253938 CGATACCATTGAGAATGTTAAAGCTAAGATCCAAGATAAGGAGGGTATCCCACCGGATCA 1253997 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | || || ||||| | || || | ||||| | ||| ||||| Sbjct 1253998 GCAACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACAA 1254057 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || || ||| |||| |||||| Sbjct 1254058 CATCCAAAAGGAGTCAACTCTCCATCTGGTTCTGCGT 1254094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500080924508800