Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq94 107 2e-18 >seq94 Length=697689 Score = 107 bits (118), Expect = 2e-18 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 |||||||| | ||||| |||||||| || || || || |||||| ||| | | | Sbjct 559811 TGTCATGTCTAATGATAACATACCCCTCCACTATGGGAGTTTTTGAAGA-AACTGTCGCC 559869 Query 154924 -AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 | || || | || || || | | ||||| || |||||||||||||| || || | Sbjct 559870 GATATTTGCGATATGGTACACAAACACGGTGGGCAAGTATATCTTGATGGTGCTAACATG 559929 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 ||||| || || | ||| ||| |||| ||||| ||||||| ||| |||| Sbjct 559930 AATGCCCAAGTTGCACTTTGTCGACCTGGTGATTATGGGAGTGATGTATCCCATTTAAAT 559989 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 | ||||| || |||||||| || |||||||||||||||||||| | || || || || Sbjct 559990 CTGCATAAGACTTTCTGTATACCTCATGGAGGTGGAGGTCCTGGTATGGGACCAATTGGC 560049 Query 155103 GTA 155105 ||| Sbjct 560050 GTA 560052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579106405848800