Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq94 113 5e-20 >seq94 Length=697689 Score = 113 bits (124), Expect = 5e-20 Identities = 170/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||||||| | ||||| ||||| || || || || || |||||| || || Sbjct 559811 TGTCATGTCTAATGATAACATACCCCTCCACTATGGGAGTTTTTGAAGAAACTGTCGCCG 559870 Query 159599 AGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAA 159658 | || || | || || || | | ||||| || ||||||||||||||||| || | | Sbjct 559871 ATATTTGCGATATGGTACACAAACACGGTGGGCAAGTATATCTTGATGGTGCTAACATGA 559930 Query 159659 ATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACT 159718 |||| || || | || ||| |||| ||||| ||||||| ||| |||| Sbjct 559931 ATGCCCAAGTTGCACTTTGTCGACCTGGTGATTATGGGAGTGATGTATCCCATTTAAATC 559990 Query 159719 TACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTG 159778 | |||||||| |||||||| || |||||||||||||||||||| | || || ||||| | Sbjct 559991 TGCATAAGACTTTCTGTATACCTCATGGAGGTGGAGGTCCTGGTATGGGACCAATTGGCG 560050 Query 159779 TA 159780 || Sbjct 560051 TA 560052 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 160042 GATATAGCAAAGAGACTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCTGTG 160101 || || || ||| || | |||||||||||||||||||| ||||| | || |||||||| Sbjct 560432 GACATTGCTAAGCGATTGATGGACTATGGATTCCATGCTCCTACTATGTCCTGGCCTGTA 560491 Query 160102 TTAGGAACTATGATGGTAGAACCAACAGAGTCTGA 160136 || || ||||| | ||||||||||||||||| Sbjct 560492 ACTGGGACGTTGATGATTGAACCAACAGAGTCTGA 560526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587943182345200