Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq10 176 1e-38 seq39 120 7e-22 >seq10 Length=2329298 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| ||||| ||||| || ||||||||||| ||||||||||||| || || Sbjct 1253188 TCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGT 1253129 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||| || | ||| || || || |||||||| || ||||| ||||| |||||||| Sbjct 1253128 ACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCC 1253069 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||||| || || |||||||| || || || ||| ||||| | Sbjct 1253068 CTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAA 1253009 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | |||||| || || | |||||| ||||| | |||||| Sbjct 1253008 GGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 152 bits (168), Expect = 1e-31 Identities = 162/214 (76%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| || ||||| || ||||| ||||| || |||||||||| | ||| | ||||| Sbjct 1253863 CAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATC 1253804 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| | ||||||||| || ||||| | |||||| || ||||| ||||| ||||||||||| Sbjct 1253803 TTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTC 1253744 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| ||| || ||||| || || || || ||| || || | |||| || Sbjct 1253743 CTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGT 1253684 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| || |||||||| || ||||| | |||||| Sbjct 1253683 CTTACCGGTCAAAGTCTTAACGAAAATCTGCATT 1253650 Score = 149 bits (164), Expect = 1e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||| || || ||||||||||||||||| | ||| || | |||||||| | || Sbjct 1254310 GTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCCAATTG 1254251 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || |||||||| ||||| || ||||| ||||| ||||| || || |||||||| Sbjct 1254250 CTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGAATTTT 1254191 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || ||||| || || ||| ||||| | || | ||| || || || Sbjct 1254190 AGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTACCAGT 1254131 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 ||||||||| ||||| | |||||| Sbjct 1254130 CAAAGTTTTCACGAAGATCTGCATT 1254106 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || |||||||| || || || || || || |||| | ||| | || ||||| | ||| Sbjct 1254993 TGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCCAATTGC 1254934 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || |||||||| |||||||| ||||||||||| ||||||||||| ||||| || Sbjct 1254933 TTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGAATCTTG 1254874 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||||||||| ||||| || ||| || || | || | || || || || Sbjct 1254873 GCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTGCCGGTT 1254814 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 ||||| || ||||| | |||||| Sbjct 1254813 AAAGTCTTCACGAAGATTTGCAT 1254791 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| || |||||||| ||||| | | || | ||||| || | || Sbjct 1253626 GTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCCAATTG 1253567 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || ||||| |||||||| || ||||||||||| ||||| || |||||||| || Sbjct 1253566 TTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTT 1253507 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| || || ||||| ||||| ||| ||| ||||| | || | ||| || || || Sbjct 1253506 TGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTGCCAGT 1253447 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | |||||| ||||| | ||||| Sbjct 1253446 AAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 134 bits (148), Expect = 3e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || |||||||| || |||||||| || | | || | |||||| || | || Sbjct 1254538 GTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGCCCATCCTCCAATTG 1254479 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| || || || | ||||| || ||||| ||||||||||||||||||||||| || Sbjct 1254478 TTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGAATCTT 1254419 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| ||||| || || ||||| | ||| | ||||| || || Sbjct 1254418 AGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGATGGTCTTCCCAGT 1254359 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || | |||||| Sbjct 1254358 TAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||||| || | || ||||| || || || || ||||||| ||||| | Sbjct 1255236 AGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGTGCGG 1255177 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||| || ||||| || || || | ||||| || ||||||||||| ||||| Sbjct 1255176 CCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCTTCC 1255117 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || ||||| |||||| || |||||||| || ||| ||| ||||| | || Sbjct 1255116 TTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAAAGTG 1255057 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | ||| || || ||||| || || || || | |||||| Sbjct 1255056 ATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATT 1255018 Score = 127 bits (140), Expect = 5e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| |||||||| || ||||| | || || | |||||||| ||||| Sbjct 1252941 TGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCTAGCTGT 1252882 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| | || ||| |||||||||||||| || ||||| || ||||| || Sbjct 1252881 TTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTA 1252822 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||| |||||||| || ||| || ||||| | ||| | || || ||||| Sbjct 1252821 GCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTGCCTGTT 1252762 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 | || || || || | ||||||| Sbjct 1252761 AGTGTCTTCACAAAGATCTGCATTT 1252737 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||| || | ||| ||||||||||| || ||||| || || |||| ||| || | Sbjct 1254780 AGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTGCGT 1254721 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| | ||||| || || || || | || || |||||||| || |||||||| Sbjct 1254720 CCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCTTCC 1254661 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || ||||| || ||| || || ||||| ||||| ||| ||| ||||| | ||| Sbjct 1254660 TTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAAGTA 1254601 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||| || || ||||| || || || || | ||||| Sbjct 1254600 ATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || |||||||| || || ||||| || || |||| ||||| | ||||| || ||||| Sbjct 1253397 TGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCATCCTCAAGCTGT 1253338 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || || || | || ||||| ||||||||||| |||||||| ||||| ||||| Sbjct 1253337 TTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATTTTG 1253278 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || || || ||||| || || ||| || ||||| | |||| || || || ||| Sbjct 1253277 GCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGTTTTCCCAGTC 1253218 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | |||||||| || | ||||| Sbjct 1253217 AGTGTTTTTACAAAAATCTGCAT 1253195 Score = 116 bits (128), Expect = 8e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| || || ||||| ||||| ||||| || |||||||||| | ||| | ||||| Sbjct 1254091 CAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATC 1254032 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || | || ||||| || ||||| |||||||| || || || || || || || || || Sbjct 1254031 CTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTATC 1253972 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || || || || ||||||||||| || || || ||||| || || | || Sbjct 1253971 TTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGATAGT 1253912 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || ||||| || ||||| || | |||||| Sbjct 1253911 TTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 >seq39 Length=1160777 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || |||||||||| ||| || | ||||| || ||||| Sbjct 535126 GTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTG 535067 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||||| ||||| || || || ||||| ||||| || || || || ||||| || || || Sbjct 535066 TTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTGGATCTT 535007 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || ||||| ||||| || || || ||||| || | ||||| || || Sbjct 535006 CGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTTACCGGT 534947 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||| | ||||| Sbjct 534946 TAGGGTTTTTACGAAGATCTGCAT 534923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109272707151065