Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10 107 1e-18 seq39 89.7 3e-13 >seq10 Length=2329298 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || || ||||||||||| || || || | || |||| || |||||||| || ||||| Sbjct 1252929 TCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAG 1252870 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||||| | || | ||||| || || |||||| || ||| | Sbjct 1252869 ATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTTT 1252810 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | |||||| || | ||| || ||||| || || || ||||||||| Sbjct 1252809 TCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACA 1252750 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 1252749 AAGATCTGCATTTT 1252736 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||| |||||||| | ||| || ||||||||||||||||| ||||| | ||| | Sbjct 1254777 CTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTGCGTCCG 1254718 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| || || || ||||| |||| || ||||||||| | || | || ||||| Sbjct 1254717 TCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCTTCCTTA 1254658 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || |||||| || || | | || | ||| | ||||| || | || || Sbjct 1254657 TCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAAGTAATC 1254598 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || || | ||||| ||||| ||||||||| Sbjct 1254597 GTTTTGCCAGTCAACGTCTTAACAAAAATCTGCATA 1254562 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || |||||||| ||||| || || | | | || |||| ||| Sbjct 1253631 ACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCC 1253572 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||||| || ||||| || ||||||||||| ||| | || | || ||||| || | Sbjct 1253571 AATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGA 1253512 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | ||| | ||||| || | || || ||||| Sbjct 1253511 ATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTG 1253452 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| || ||||||||| Sbjct 1253451 CCAGTAAGAGTTTTCACGAAAATCTGCATA 1253422 >seq39 Length=1160777 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| || || ||||| | || |||| || Sbjct 535131 ACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCA 535072 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| ||||| || || || || || || ||| | || | ||||||||||| Sbjct 535071 AGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTGG 535012 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | | || | || || ||| || || | || ||||| || Sbjct 535011 ATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTTA 534952 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || || || || || ||||||||||| || Sbjct 534951 CCGGTTAGGGTTTTTACGAAGATCTGCATGTT 534920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324575459643960