Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq13 340 2e-88 seq170 170 2e-37 >seq13 Length=2077869 Score = 340 bits (376), Expect = 2e-88 Identities = 1207/1891 (64%), Gaps = 52/1891 (3%) Strand=Plus/Minus Query 46974 TTTTCCACAGTAAACTTAATTGGAT-TACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 || || |||||||| | |||||| | | || |||| |||||||| | ||| |||||||| Sbjct 1821405 TTATCAACAGTAAATTGAATTGGTTGTGCT-GCTGGCTTTGTTCGGAGATAGTACATACC 1821347 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 ||||| | || | |||| ||||| || || || | |||| |||| | || Sbjct 1821346 CGTCTTCAGGCCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGG 1821287 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 |||| || |||||||| | |||||||| |||||||| || ||||| | || || || Sbjct 1821286 CTCTGCAACGTGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGC 1821227 Query 47153 CATATCTAAAATAACCCTTTGTGGT---------ATCTCCCATACTGTTTTATAAATTTG 47203 ||| | | |||||| | || ||||| || || ||||| || Sbjct 1821226 CATGTGCA---------TTTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCAT 1821176 Query 47204 TTTAATGTCTTCTGGGAGATTAG-TATTT--TGAATAGATCCTCCgttttctataatttt 47260 ||| | || |||| || ||| | |||| || |||| || ||||||| Sbjct 1821175 CCGAATATTCTCCGGGATCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGC 1821116 Query 47261 gttttttaattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATT 47320 ||| || | || | |||||| | |||| ||||| |||||||| | || Sbjct 1821115 GTTCTTCATATCTTCGTCCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTT 1821056 Query 47321 AACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTC 47380 || | | |||||| || || || || | ||| || || || || || || || Sbjct 1821055 TACGACTATAAATTCACCCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTC 1820996 Query 47381 TATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAA 47440 | || ||||| || |||| |||||| | ||| |||||||| ||||| | || | ||| Sbjct 1820995 AAAGGACTCATTGTTGCCAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAA 1820936 Query 47441 TAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAG 47500 ||| ||| || || ||||| | | ||| | ||| ||||| | Sbjct 1820935 CAAGGAATTCCTAACGCCATACTGCTTTATTTTCTCCTTAAGCTCCGCCCAGTCCCATAA 1820876 Query 47501 ATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACC 47560 || | || | ||| | ||| || || || |||||||| || | ||| || || Sbjct 1820875 ATTGGTGGGCGTTTTGTCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCC 1820816 Query 47561 ATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACT 47620 | || |||| || || || || |||||| ||||| || || ||||| | || | Sbjct 1820815 CTCGTAGGTTTCGTACGGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAGGGCTCC 1820756 Query 47621 ATAATATATTGTTTCAAATATTT-----TT--ATGTTT-AGATTCCTTGCTTCTGATGAT 47672 || || || |||||||| || | || || ||| || |||| |||| Sbjct 1820755 GTAGTAAATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTT-------- 1820704 Query 47673 TCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATT 47732 || | || || |||||||| |||| ||||| ||||| || ||||| Sbjct 1820703 TCGTAGGGGTAACGCATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATC 1820644 Query 47733 GGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATA 47792 || | || | | || || || ||||||||| | ||||| | ||| ||||| ||| Sbjct 1820643 GGGCGGTGCTTCATGTTGGACTTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATA 1820584 Query 47793 ATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAAC 47852 || || |||||| || | | | ||||| | || ||| || Sbjct 1820583 ATCTTGTTTAGATTCCTCGTCACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATAC 1820524 Query 47853 TTGTTATTTA---TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACC 47909 || || | | || ||| | || | || ||||| || | ||||||||| |||| Sbjct 1820523 TTCTTTTCCGGCGTGACGAACATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATT 1820464 Query 47910 TCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCC 47969 || | | | || | || ||||| | |||||||| | |||||| ||||| || Sbjct 1820463 TCGTCGGCGGCCGAGTACTCTACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCG 1820404 Query 47970 AAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCA 48029 | ||| || || ||| | |||| |||||||||||||| | |||| |||| ||||| Sbjct 1820403 ATATTCTGCTGGTTACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCT 1820344 Query 48030 GTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTA--TAACAGCTC 48087 || |||| |||||||||||| |||| ||| | ||| ||||| | | | | | Sbjct 1820343 GTCTCTACCTGAGATTCAATTATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTG 1820284 Query 48088 TAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACAT 48147 || || | |||||||| || |||| || || |||| ||| || |||| | Sbjct 1820283 --GCACGCCCCTCGTTCTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCCCACACCT 1820226 Query 48148 TATCTAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTC 48207 | | ||||||||| ||| ||||||||||| ||||| || ||||| | || | Sbjct 1820225 CAAAGAGGTCAGGACATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCCTCGACCC 1820166 Query 48208 TAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTT 48267 | ||||||| | ||| || ||||| || || |||||| || | || | | |||| Sbjct 1820165 TCTTCATAAAGAGATCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTT 1820106 Query 48268 CATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTA 48327 | |||| | ||| | || || | ||||| || | | ||| |||||||| || || | Sbjct 1820105 CTGCGCCAGTGTTCTTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCA 1820046 Query 48328 AATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTAT 48387 | || || || | | || || |||||||| ||||| || || | ||| | ||| | Sbjct 1820045 AGTAAATAGCGAAGGCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGT 1819986 Query 48388 TGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATAT 48447 ||||| | || || ||||| || || | |||||| ||||| ||||| || || | ||| Sbjct 1819985 TGTTAAACACCCTCAACATGGGAACGAGACCATTAGATATGCCATTTGTGCCAGCTATAG 1819926 Query 48448 AACTTCCACTAGCTCTTATATTACTAA--TTGAAATACCTATACCACCTGCCATTTTAGA 48505 | |||| | |||| ||| | | || || || || || ||||| | || || Sbjct 1819925 CAGTTCCCTTCGCTCGGATACAATGGACGTTTAA--GCCGATTCCTCCTGCGTTCTTCGA 1819868 Query 48506 TATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATT 48565 || | ||| || || | | | | | ||||| || || ||| || | ||| | Sbjct 1819867 GATCATAGCGCAGCGCTCCACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGT 1819808 Query 48566 TAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGA 48625 ||||||||||| || | ||| ||| ||| || | | || |||||||| || Sbjct 1819807 CAATAGAAAACACGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGA 1819748 Query 48626 TGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC 48685 ||||||| | || |||| || || | | || || ||||| || | | ||| ||||| Sbjct 1819747 TGCATGAGTGAAATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATC 1819688 Query 48686 -CCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTT 48744 || | || || || | || || | ||| ||||| | ||||||| ||| | |||| Sbjct 1819687 TTCACCG-TGAATTCCGACTGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTT 1819629 Query 48745 TGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATG 48804 | ||| ||||| |||||||| || |||| | |||||||| || || |||||||| Sbjct 1819628 TACCATTGATTTTTAAAAGATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAAT 1819569 Query 48805 AAAAGTCGTTATCATTAATAATTGATGAATT 48835 |||||| || | |||||||| ||| || Sbjct 1819568 TGAAGTCGCGGTCGTAAATAATTGCTGAGTT 1819538 >seq170 Length=322284 Score = 170 bits (188), Expect = 2e-37 Identities = 250/351 (71%), Gaps = 2/351 (1%) Strand=Plus/Minus Query 18832 CAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTT 18891 || ||||| || || | || |||||||| || || || | ||||| ||||| || ||| Sbjct 24368 CAGTTCATCCCAATAAGATTTACAGGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTT 24309 Query 18892 ACTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTA 18951 ||||||||||| || || | || || ||| | || | || ||||||||| Sbjct 24308 ACTGCCTCTGAGATTATCTCGATAATTCGATCCCTGCTGGGCTTCTGTACAAGATGTTTG 24249 Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 ||||| ||||| |||||||| ||||||| || ||||| | ||| | ||| || ||| Sbjct 24248 AACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAA 24189 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | ||||||||| | || || || || | |||||| || || ||||| ||| Sbjct 24188 AAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCA 24129 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 ||||| || || || ||||| |||||||||| || |||||| || || |||| | | Sbjct 24128 CTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATTAGC-TGA 24070 Query 19132 TTATTATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGG 19181 | ||| ||||| || ||||| |||||||||||||| ||||| || Sbjct 24069 CTTGCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGG 24019 Score = 91.5 bits (100), Expect = 2e-13 Identities = 182/270 (67%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283 ||| |||| ||| | || || || | |||||||||||| || || | ||||||||| || Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTC 19343 || || || ||||| ||| | | ||||| | || || || || | || | || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 19344 GACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAAT 19403 || | ||||||||| || ||||| || || || || || |||| || ||| ||| Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 19404 AAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTAC 19463 || || || ||| | | | || | | | ||||| | | || || || | | ||| Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 19464 TTCTTCAACTGTCCAAAAAGAAGCCTCTGC 19493 ||| || ||||||||||| || || || || Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGC 23650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562005547639800