Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq3563 226 2e-54 seq3509 217 1e-51 seq650 98.7 8e-16 >seq3563 Length=1406 Score = 226 bits (250), Expect = 2e-54 Identities = 274/366 (75%), Gaps = 8/366 (2%) Strand=Plus/Minus Query 29725 AAGTCGTCCAGGTTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCC 29784 ||||| || | ||||||||| |||| || || ||||| | ||||| || || || | Sbjct 403 AAGTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAACT 344 Query 29785 CTCTCGAGCTGAGTCTT-CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 29843 || | ||||| |||| || |||||| | ||||| ||| || || ||||| ||||| | Sbjct 343 CTTTTAAGCTGC-TCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAAA 285 Query 29844 GGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29902 ||| |||||||| ||||| || ||| |||| | |||||||||| | |||||| || || | Sbjct 284 GGTATGGACAAAATCTCCAGGCTTCAAGCCTG-TGACGTGAGCAACCATGTAAGTAAGAA 226 Query 29903 GAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGA 29962 | | |||||||||||||||||| || ||||| || |||||||| | |||||||| |||| Sbjct 225 GGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGA 166 Query 29963 GCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAA 30022 |||| ||||| |||||||||| || || ||||| | | |||||| || |||| Sbjct 165 GCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAGTGGCAAGGCGGAA 106 Query 30023 GAGCCA--TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 30080 |||||| ||||| | ||| |||||||||||| || |||||| || | ||| | Sbjct 105 GAGCCATCTGAGG--GATGTCGACTGGGTTCCAGGCGGTCATGATGATTCGGCGGTCGTT 48 Query 30081 TGGGTT 30086 ||||| Sbjct 47 AGGGTT 42 >seq3509 Length=1415 Score = 217 bits (240), Expect = 1e-51 Identities = 265/354 (75%), Gaps = 8/354 (2%) Strand=Plus/Plus Query 29737 TTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGA 29796 ||||||||| |||| || || ||||| | ||||| || || || | || | ||||| Sbjct 1025 TTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAACTCTTTTAAGCTGC 1084 Query 29797 GTCTT-CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAA 29855 |||| || |||||| | ||||| ||| || || ||||| ||||| | ||| |||||||| Sbjct 1085 -TCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAA 1143 Query 29856 CTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGG 29914 ||||| || ||| |||| | |||||||||| | |||||| || || || | |||||||| Sbjct 1144 ATCTCCAGGCTTCAAGCCTG-TGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGG 1202 Query 29915 CGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGA 29974 |||||||||| || ||||| || |||||||| | |||||||| |||||||| ||||| | Sbjct 1203 CGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATA 1262 Query 29975 GCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCA--TGAG 30032 ||||||||| || || ||||| | | ||||| || |||||||||| |||| Sbjct 1263 GCTCTCCGTTTGCAACATAGAACTGGACGAGGCAATGGCAAGGCGGAAGAGCCATCTGAG 1322 Query 30033 GCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTT 30086 | | ||| |||||||||||| || |||||| || | ||| | ||||| Sbjct 1323 G--GATGTCGACTGGGTTCCAGGCGGTCATGATGATTCGGCGGTCGTTAGGGTT 1374 >seq650 Length=6480 Score = 98.7 bits (108), Expect = 8e-16 Identities = 226/338 (67%), Gaps = 12/338 (4%) Strand=Plus/Plus Query 30010 TGGCACGGAGGAAGAGCCAT--GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 ||||| || ||||||||||| |||| | ||| |||||||||||| || ||||| Sbjct 1 TGGCAAGGCGGAAGAGCCATCTGAGGG--ATGTCGACTGGGTTCCAGGCGGTCATGATGA 58 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127 | || | ||| | ||||| | | ||| | || | || |||||||| | | Sbjct 59 TTCGGCGGTCGTTAGGGTTCGTTTTAATGCGCTCAATCAACCCCTGGAGCTGATCGATTC 118 Query 30128 CCATCCCCGAGTAGTCTGCCCTCATG----TCCGTGTACTCTGCTCCGAAATGCCTCCAC 30183 | ||| ||||| | ||| || |||||||||||||| || ||||||||| Sbjct 119 CTTGCCCATCGTAGTTA----TTATGGCAATCTGTGTACTCTGCTCCAAAGTGCCTCCAC 174 Query 30184 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 30243 || ||||| || || ||||||| || |||||||| | | |||||| | ||| || Sbjct 175 TGAAACCCATATACTGGTCCCAAATCGCCCTCTTCGCGATTGGTGAAGCCGCACTTATCG 234 Query 30244 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 30303 | || || | || | ||| |||||||||| | | ||||| || | ||| Sbjct 235 AGGAATTCCCGGGCGCTGTTCCCGTCCCAGATATGAATGTTTTTCTCCTGAAGGGCCTTG 294 Query 30304 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30341 | || ||| |||| ||| ||||||||| |||||||| Sbjct 295 GCGTCCGTGCTCCCTTTGATGAACCACAGGAGCTCCTC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408544418503235