Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq49 134 1e-26 seq10 107 1e-18 seq39 105 5e-18 >seq49 Length=1022242 Score = 134 bits (148), Expect = 1e-26 Identities = 226/326 (69%), Gaps = 6/326 (2%) Strand=Plus/Minus Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126 || || || ||| ||| ||||| | ||| ||||||||||| ||| | ||||| ||||| Sbjct 653683 GGGTAGAAAATTCTTTCGCAAATCAGTTGGGCAATCCTGTCGCCCCTCTTCACTTCAAAG 653624 Query 9127 TCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATC 9186 || | |||||||| ||||| ||||| || || | ||| || | ||||||||| || | Sbjct 653623 TCGGCATCGGAATGGTTGAAAAGCACTACACCTAAGTTCCCACGGTAATCCTCGTCCACA 653564 Query 9187 ACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCGGGGCGCGATTCGA 9246 || || || || || |||||||| | ||| || || || ||||| || || |||| || Sbjct 653563 ACGCCCGCTCCAACATCGATGAAATTCTTCACAGCCAGCCCAGACCGCGGGGCGACTCTT 653504 Query 9247 CCGTAGCATCCCACCGGTAATTGCACCCGCAAGTCGGTCATGACCAGCCCCTTGCCGTGT 9306 ||||| | || |||| | ||| | | ||| |||||| | || | | ||| || | Sbjct 653503 CCGTAAGAACCTTCCGGAACTTGAATCTGCAGATCGGTCTTCACTAACTGCTTTCCCCTT 653444 Query 9307 TTTGGAATCACGGT---GTCGTAGCCGCTCTTGAGATCAAACCCAGCTGCCCTGTCCGAT 9363 |||| || || |||||| ||||| | | || || || ||||| | | ||| Sbjct 653443 GCTGGA---ACTGTATAGTCGTAAGCGCTCATTAAGTCGAAGCCTGCTGCTCGGGACGAA 653387 Query 9364 CCCTTCGTGGGCGCAAAAGCGTTTTC 9389 ||||| || || || ||||| || Sbjct 653386 CCCTTTACTGGAGCGAATGCGTTCTC 653361 >seq10 Length=2329298 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 || ||| | ||| || || ||||||||| ||||||||||| || || | ||| | || Sbjct 1253179 CAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACCATC 1253120 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| || || ||||| || || ||||||||||| | |||| |||||| ||||| Sbjct 1253119 CTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTTGTC 1253060 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 ||| || ||| ||| | | | || || | || || |||| || ||||| Sbjct 1253059 TTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGATCGT 1253000 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || | |||||| || ||||| |||||| Sbjct 1252999 CTTGCCAGTAAGAGTTTTCACGAAAATTTGCATC 1252966 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| |||| || | ||| || || ||| ||||| || |||||||| || Sbjct 1253877 CCACCACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGAC 1253818 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | ||| | || |||||||||||||||||||| |||| ||| || ||||| | ||| Sbjct 1253817 AAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGA 1253758 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || ||||| || || || ||| | | | ||||| | || ||| Sbjct 1253757 ATACCTTCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACC 1253698 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || |||||||| || || ||||||||||| Sbjct 1253697 TCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| |||| |||| ||| || || ||| ||||| || |||||||| || Sbjct 1254105 CCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGAC 1254046 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | ||| | || || || || ||||||||||| || ||||| || ||||||| || Sbjct 1254045 AAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGG 1253986 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||| || ||||| ||| ||| | | | || || | ||| || Sbjct 1253985 ATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACT 1253926 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || ||||| || |||||||| |||||||| Sbjct 1253925 TCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || |||||| || |||||||| ||||||| | || Sbjct 1254552 AGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGC 1254493 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| || ||||| ||||| |||| || || ||||| | |||| ||| || Sbjct 1254492 CCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCT 1254433 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | || || || | ||| || |||| || Sbjct 1254432 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTG 1254373 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || ||||| ||||||||||| ||||| Sbjct 1254372 ATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||| || || | ||||| || || ||| ||| || |||||||| ||||||||| Sbjct 1253649 CCACCCCGGAGACGTAGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGAT 1253590 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || | || ||||| || || || ||||| || ||||| || ||||| | ||| Sbjct 1253589 AAGGTACGGCCATCCTCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGA 1253530 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||||| || ||| | | || || || | || || Sbjct 1253529 ATTCCTTCCTTATCTTGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACT 1253470 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || |||||||| || || | |||||| || ||||||||||| Sbjct 1253469 TCCAATGTGATCGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || || |||||||||||||||||||| || | || | || ||| Sbjct 1254315 ACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCC 1254256 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || ||||| || ||||| || || || || ||||| | ||||| || ||||| || | Sbjct 1254255 AATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGA 1254196 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || || ||| | | | || || | || || |||| || |||||||| Sbjct 1254195 ATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTA 1254136 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| || || |||||||| Sbjct 1254135 CCAGTCAAAGTTTTCACGAAGATCTGCAT 1254107 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || ||||| || || || || || | || |||| ||| Sbjct 1254771 ACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTGCGTCCGTCTTCC 1254712 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || ||||| || ||||| || | || ||| || || | ||| | ||| ||||| || | Sbjct 1254711 AATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGA 1254652 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || || | || || |||| ||||||||||| Sbjct 1254651 ATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAAGTAATCGTTTTG 1254592 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || |||||||||||||| Sbjct 1254591 CCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 || |||||||| ||| || || ||||| || || || || ||| | ||| | || || Sbjct 1253403 ACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCATCCTCA 1253344 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||| ||||| ||||| |||| ||||||||||| | |||| || || || || Sbjct 1253343 AGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATCTTGG 1253284 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || || ||| ||| | | | || || | ||| || || | ||||| ||||| Sbjct 1253283 ATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGTTTTC 1253224 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||| |||||||||||||||||||| Sbjct 1253223 CCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 >seq39 Length=1160777 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||| || || || |||||||| || || | ||| Sbjct 535140 AGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGA 535081 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| |||||||| || ||||| ||||||||||| | ||| | |||||| Sbjct 535080 CCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCC 535021 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| ||| ||| | | || ||||| | ||| ||||| | || Sbjct 535020 TTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTG 534961 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | |||||||| || |||||||| Sbjct 534960 ATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCAT 534923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380869375861485