Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq170 127 4e-24 >seq170 Length=322284 Score = 127 bits (140), Expect = 4e-24 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || ||||| || | || ||||||||||| ||| || || ||||||| || ||| Sbjct 24239 CAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTCAGA 24180 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | ||||||| |||||||||||||||| || ||| |||| ||||||| Sbjct 24179 CCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTGAAGAAG 24120 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| ||||| || || || | | || || |||||| ||| |||| ||| Sbjct 24119 ATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATTAGCTGACTTGCTTGAT 24060 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | | |||||||| |||||||| || | || || | || || || || | Sbjct 24059 ATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGGTTTCAATTGCGTTG 24000 Query 48371 AAGAG 48375 ||||| Sbjct 23999 AAGAG 23995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931361689068800